Streptococcus pasteurianus: SGPB_0853
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Entry
SGPB_0853 CDS
T01524
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stb
Streptococcus pasteurianus
Pathway
stb03030
DNA replication
stb03430
Mismatch repair
stb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGPB_0853 (dnaE)
03430 Mismatch repair
SGPB_0853 (dnaE)
03440 Homologous recombination
SGPB_0853 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stb03032
]
SGPB_0853 (dnaE)
03400 DNA repair and recombination proteins [BR:
stb03400
]
SGPB_0853 (dnaE)
Enzymes [BR:
stb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGPB_0853 (dnaE)
DNA replication proteins [BR:
stb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGPB_0853 (dnaE)
DNA repair and recombination proteins [BR:
stb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGPB_0853 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAK29931
UniProt:
F5X691
LinkDB
All DBs
Position
890612..893719
Genome browser
AA seq
1035 aa
AA seq
DB search
MFAQLDTKTVYSFMDSLIDLEGYVKAAKSLGYQTVGIMDKDNLYAAFHFIEEAKKQSLQP
VVGLELSFAVEETLSLKLYLLAQDTTGYKNLMKISSKQMSSGIQLGELFNYLTGVAIVVP
YFEKLETLSLPFDYYIGVDVNSPQKAYEKPIFPLYTVRYFETNEVEALHMLHAIRDNISL
KDAPPAPQGQNLLACDILTQAFRETFPQALENQEKLISNIHYEFDTDLKLPRFNRQKPAQ
EELIERTEAGLRAKNLWLPAYQERLEKELSIIHKMGFDDYFLIVWDLLRFGRSHGYYMGM
GRGSAAGSLVSYALDITGIDPVKNNLLFERFLNEERYSMPDIDIDLPDVYRSEFLHYVRD
RYGSLHSAQIVTFSTFGAKQAIRDVFKRFGAPEHELTNITKKISFRDTLTSVYDKNLSFR
QIINSKIEYQKAFAIAKRIEGNPRQTSIHAAGVVMSDDNLTEHIPLKTGEDMMITQYDAQ
AVEANGLLKMDFLGLRNLTFVQRMQEKVAKDYGVTIDIKSIDLEDKKTLELFAAGKTKGI
FQFEQAGAINLLKRIQPCRFEDIVATTSLNRPGASDYTENFIKRRFGQEEVDLIDPLVAS
ILEPTYGIMLYQEQVMQIAQIYAGFTLGKADLLRRAMSKKKVDDMQKMESDFLEGAQQLG
RPLEAAKDLFSRMAKFAGYGFNRSHAFAYSALAFQLAYFKAHYPAVFYDIMLNYSSADYI
TDALDSQFKVKKIDINTVPYNNKISDGHIYLGLKNLRGVPRDLCYWIIENRPFNSIEDFL
TRLPENYQKMDMITPLVEVGAFDQFDRNRRKIIENLEPLFIFVNELGSLFADTSYSWIET
EDYPNAEKYRLEQSLLGVGISPHPLLEIARQSTKGFTALADLQENTEATILVELNQIRVI
RTKTKGEQMAFLSVTDTQKKFDVTLFPETFVRFKDKLQEGRFYYFTGKIQNRNNHLQMIL
NHIQEASSERLWLLLPNHLHDNEISEILSQYPGNIPVILHYQDSKQTLQSQRHLVQRTTE
LIEALSSYTLKTIYQ
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccagttagacacgaaaactgtctattcttttatggatagcttgattgactta
gaggggtatgttaaagcggctaaatctttaggttatcaaacagttggaattatggacaag
gataatctttacgcagcttttcattttattgaagaggctaaaaaacaatccttgcagcct
gttgttgggttagagttatcttttgccgttgaggagacactatcgttaaaactctaccta
cttgcacaagatacaaccggttataaaaatttgatgaagatttcgagtaaacagatgtct
tcaggcattcagctaggcgaactctttaattatttaactggtgtagccatagtagtgcct
tattttgagaaattagagacattgtcgcttccttttgattactacattggggttgatgtt
aattcgcctcaaaaagcatatgaaaagccaatttttccactttatacggttcgttatttt
gaaactaatgaggtggaagctctccacatgctacacgctattcgtgataatattagctta
aaagatgcgccgcctgcacctcaaggacaaaatctgttagcttgtgatattttgacacaa
gcgtttagagagacatttccgcaagcgttagaaaatcaggaaaagcttatatcaaacatt
cattatgagtttgacacagatttaaaattgccaagatttaatcgtcaaaagccagcacag
gaagaattgattgaacgaacagaagcgggattgcgagctaaaaatttgtggctgccagct
tatcaggagcgtttagagaaagaactatcaatcatccataaaatgggcttcgatgattat
ttcttaattgtctgggacttgttgcgttttggtcgaagtcatggttattatatgggaatg
ggacgtggttcagctgcagggagcttggtttcttacgcccttgatattacggggattgac
ccagtcaaaaataacttactttttgaacgtttcttaaatgaagaacgctatagcatgcca
gatattgatattgacttgccagatgtgtatcgtagcgagtttcttcattatgtacgtgac
cgttacggaagtttacattcagcgcagattgtgacgttttcaacctttggagcaaaacaa
gccattcgtgatgtttttaaacggtttggggctcctgaacatgagttgacaaatatcacg
aaaaaaatcagtttcagagatactttaacatcggtttacgacaaaaatctttcttttcgt
cagattattaattccaaaattgaataccaaaaagcatttgcaattgcaaaacgtattgaa
ggcaatccacgtcagacctctatccacgcggcaggggttgttatgagcgatgataattta
acagaacacattccgttaaaaactggcgaagacatgatgattacgcagtatgatgctcaa
gcagttgaggcaaacggtcttttgaaaatggactttcttggcttgcgtaatttgacattt
gttcaacgtatgcaagaaaaagttgctaaagactacggagttactattgacattaaatca
atagatttagaggataaaaagactttagaattatttgcggctggaaagactaagggaatc
ttccagtttgaacaggctggagcaattaatcttttgaaacgtattcaaccatgccgattt
gaagatattgttgcaacaactagtttaaaccgaccaggtgctagtgattatactgagaac
ttcattaaacgtcgttttgggcaagaagaagtggatttgattgatccattagtagcatcg
attttagaaccaacctacggtatcatgctttatcaagagcaggtcatgcaaattgctcaa
atttatgcaggctttacccttggaaaagcggatttgttacgccgtgccatgtctaagaaa
aaggttgatgatatgcaaaaaatggaaagtgatttcttagaaggagcgcaacaattaggg
cgtccgcttgaagcggcaaaggatttatttagccgtatggcaaaatttgctggatatggt
tttaatagaagccacgcttttgcctattcagctttagcttttcaacttgcttattttaaa
gcccattatcctgctgttttttacgatatcatgttgaattattctagcgctgactatatt
acagatgctctagattcacaatttaaagttaaaaaaatcgatatcaataccgttccttac
aacaataaaatttcagatggacacatttaccttggtttaaaaaatctaagaggtgttcca
cgtgatttatgctactggattatcgaaaatcgcccgtttaatagcattgaggatttctta
acacgattgccagagaattatcaaaaaatggatatgattacacctttggtagaagttggt
gcctttgaccaatttgacagaaatcgccgaaaaatcattgaaaacctagagccccttttt
atctttgtcaatgagcttggtagtctatttgcggatacatcttatagttggattgagaca
gaagattatccaaatgctgaaaaataccgcttagagcagagtttgttaggcgtaggaatt
agcccacatccactattagaaatcgcaagacaatccacaaaaggttttacagcactagca
gatttgcaagaaaacaccgaagcaaccatcttggtagaacttaatcagattcgtgtcatc
aggacaaaaacgaaaggtgagcaaatggcatttttgagtgttacagatactcagaaaaaa
ttcgatgttactttgtttccagaaacctttgtgcgtttcaaagataagcttcaagaagga
agattttattattttactggaaaaattcagaatcgaaataaccacttgcagatgatttta
aatcacattcaagaggcaagtagtgaacgattatggctcttacttccaaatcatctccac
gataatgagatttctgagatattatcacaatatcctggaaacattccagtgattttacac
tatcaagatagtaagcaaacattgcaaagtcaaagacatctggttcaaaggacaactgag
cttattgaagcattatcaagctatactttgaaaacgatttatcaataa
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