Streptomyces sp. BRB040: ABDE16_04990
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Entry
ABDE16_04990 CDS
T11010
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00061
Fatty acid biosynthesis
stbr00071
Fatty acid degradation
stbr01100
Metabolic pathways
stbr01212
Fatty acid metabolism
stbr02024
Quorum sensing
stbr04146
Peroxisome
Module
stbr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABDE16_04990
00071 Fatty acid degradation
ABDE16_04990
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABDE16_04990
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABDE16_04990
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stbr01004
]
ABDE16_04990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stbr04147
]
ABDE16_04990
Enzymes [BR:
stbr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABDE16_04990
Lipid biosynthesis proteins [BR:
stbr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABDE16_04990
Exosome [BR:
stbr04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABDE16_04990
Exosomal proteins of breast cancer cells
ABDE16_04990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
XAR09188
LinkDB
All DBs
Position
complement(1086021..1087550)
Genome browser
AA seq
509 aa
AA seq
DB search
MATLSVAAVLAENARRRPDKEALVEGDLRLTFAEVWRRARAQAGALVGLDVRPGDRVALM
APNTADFPVAYYAVAAAGAVVVPVHLLLSAAEVEHVLRDSGATLLLCHPAQAETGAAAAR
ATGVRMLTLGDESEFGQLAAAAEPLPSYVTRNADDPAVVFYTSGTTGVPKGAVLSHFNLV
MNATVNAFDANDIRPDDVALGALPLFHAFGQTVSLNSTWRAGATLVLLPRFDAARAIELM
VKEGVNTFHGVPTMFVALAAAAPGAEALPELRVCISGGASLPVAVLERFEEAFGAKIYEG
YGLSETSPAAAVNQPVFGARPGTIGHPLWGVDVEIARAEVEGAVELLPPGELGEVVVRGH
NVFSGYLGRPEATAEALVDGWFRTGDLGTKDEDGFLRIVDRKKDVIIRGGYNVYPREVEE
VLMRHPGIAQVAVIGLPDALHGEEVCAVVVRAPGTTPDAVPDAAGVTEWSKQHLGRHKYP
RRVEFADELPLGPSMKVLKRELRATYTER
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctctccgtcgccgccgtcctcgccgagaacgcccggcgccgtcccgacaag
gaggcgctggtcgagggcgacctgcggctgaccttcgccgaggtgtggcggcgggcccgc
gcccaggccggtgccctcgtcggcctggacgtgcggccgggggaccgggtggcgctgatg
gcaccgaacaccgccgacttccccgtcgcgtactacgccgtcgccgcggccggcgccgtc
gtcgtgccggtgcatctgctgctgtcggcggccgaggtcgagcacgtcctgcgcgacagc
ggcgccaccctgctgctgtgtcacccggcgcaggcggagaccggggccgccgccgcccgg
gcgaccggcgtgcgcatgctcacgctcggcgacgagtccgagttcggccaactcgccgcc
gccgccgagccgctgccctcgtacgtcacccggaacgcggacgacccggccgtcgtcttc
tacaccagcggcacgaccggcgtccccaagggcgccgtgctcagccacttcaacctggtg
atgaacgcgaccgtcaacgccttcgacgccaacgacatccggcccgacgacgtggcgctc
ggcgcgctgcccctgttccacgccttcggccagaccgtctccctcaactccacctggcgg
gcgggcgcgaccctcgtcctcctgccgcgcttcgacgcggcgcgtgcgatcgagctgatg
gtgaaggagggcgtcaacaccttccacggggtaccgaccatgttcgtcgccctcgccgcc
gcggcgcccggggccgaggccctgccggagctgcgggtgtgcatctcgggcggcgcctcc
ctgccggtggccgtcctcgaacggttcgaggaggccttcggggcgaagatctacgagggc
tacggtctgtcggagacctctccggccgcggccgtgaaccagccggtgttcggcgccagg
cccggcaccatcggccacccgctgtggggcgtcgacgtggagatcgcccgcgccgaggtc
gagggcgccgtggaactgctgccgcccggtgaactgggcgaggtcgtcgtacgcggccac
aacgtcttctccggctacctcggccgccccgaggccaccgccgaggcactcgtcgacggc
tggttccgcaccggggacctgggcaccaaggacgaggacgggttcctcaggatcgtcgac
cgcaagaaggacgtcatcatccgcggcggctacaacgtctatccgcgggaggtcgaggag
gtgctgatgcgccaccccggcatcgcccaggtcgccgtcatcgggctcccggacgcactg
cacggcgaggaggtgtgcgccgtggtcgtacgcgcccccggcacgacgcccgacgcggtg
ccggacgcagccggggtcaccgagtggtccaagcagcacctcgggcggcacaagtacccg
cgccgggtggagttcgccgacgagctgccgctcgggccgagcatgaaggtgctgaagcgg
gagctgcgggcgacctacaccgaacgctaa
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