Streptomyces sp. BRB040: ABDE16_06120
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Entry
ABDE16_06120 CDS
T11010
Name
(GenBank) exo-alpha-sialidase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00511
Other glycan degradation
stbr00600
Sphingolipid metabolism
stbr01100
Metabolic pathways
stbr04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
ABDE16_06120
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
ABDE16_06120
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
ABDE16_06120
Enzymes [BR:
stbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
ABDE16_06120
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Ortholog
Paralog
GFIT
Motif
Pfam:
BNR_2
Laminin_G_3
BNR_3
Laminin_G_2
DUF4185
Laminin_G_1
Motif
Other DBs
NCBI-ProteinID:
XAR09400
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All DBs
Position
1360078..1361994
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AA seq
638 aa
AA seq
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MPPRPPRSLWLALVASCALAVPAPPVFAQPGGRAPEFGEQVLFDAARDPGGYACFRIPAI
VRTTVGTLLAFAEGRVLDCGDAGDIDIVLKRSTDGGRTWGPLQVVNDGGGDTHGNPAPVV
DRDTGRVLLLETYNAGRADAGNCAVPCARTPHLQHSDDDGRTWSAPRDLGPEILPPTWNS
WYATGPVHGVQLTGGAHPGRLVVGVNAETWDGERSERGVPPAGGRGRVTANHAALVVSDD
GGAHWRTGATDTWPVAADGTFRQKPSELTLTERADGALLVSGREEHGTDLGHRTQALSRD
GGDSFTAPFRALPGLYAPQVQGALLRLDDRVLLSAPADPDRRRTMTLRSSYDGGATWDGA
DRGTVVTRDWSGYSDLVAVDDDTVGLLYEGGASDARDEIRFARFTEDWPAPPRPADPTTP
DLAPGAAPATVLGGAGTTDGAVGGALAFDGADDAVRLPYDGRLPLGDGDFTASLWFRYTA
ADGEQPLLWMGGIGTTQPQVWLRAEPGDGRVRGLITAREGAAAPRSAWVDTDRAYDDGRW
HRLALRRGGGRLTLFVDGAPVAGTADVPGSVSRDSPFGVHIGERMDGRARFTGAVDDVRV
WKRALTDEEIAAGAPASATGNPVLHLPMDRVDRTDAGG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccgacctccccgctccctctggctcgccctcgtcgcgtcgtgcgcgctggcc
gttcccgcgccccctgtcttcgcccagcccggcgggcgggcgccggagttcggggagcag
gtgctcttcgacgcggcccgggacccgggcggctacgcctgcttccgcatcccggcgatc
gtgcgcacgacggtcggcacgctgctcgcgttcgccgagggccgcgtcctcgactgcggg
gacgcgggcgacatcgacatcgtcctcaaacgctccaccgacggcggacgcacctggggc
cccctccaggtcgtcaacgacggcggcggcgacacccacggcaacccggccccggtcgtc
gaccgcgacaccggccgggtcctcctgctggagacgtacaacgcgggccgcgcggacgcc
ggcaactgcgcggtgccctgtgcccgcacaccgcacctccagcacagcgacgacgacggc
cgcacctggtccgcgccccgcgacctgggccccgagatcctgccgcccacctggaactcc
tggtacgccaccggtcccgtgcacggcgtccagctcaccggcggcgcccaccccggccgg
ctcgtcgtcggcgtcaacgcggagacctgggacggcgagcgaagcgagaggggggtcccc
ccggccggaggccgggggagggtcacggccaaccacgccgccctcgtggtcagcgacgac
ggcggcgcgcactggaggaccggcgccaccgacacctggcccgtcgccgccgacggcacc
ttccggcagaagccctccgaactgaccctcaccgagcgggccgacggtgcgctcctggtc
agcgggcgcgaggagcacggcaccgacctcggccaccgcacccaggccctcagccgcgac
ggcggcgacagcttcaccgcgcccttccgcgccctgcccggcctgtacgccccgcaggtg
cagggcgcgctgctgcgcctggacgaccgcgtcctgctgtccgcgccggccgatccagac
cgccgccggacgatgacgctgcgctcctcctacgacggcggcgcgacctgggacggtgcg
gaccgcggcacggtcgtcacccgggactggtcgggctactcggacctggtggccgtcgac
gacgacacggtgggcctgctgtacgagggcggggcgtccgacgcccgcgacgagatccgc
ttcgcccgcttcaccgaggactggccggcgccgccccggcccgccgacccgaccaccccc
gacctggcgcccggtgccgctcccgcgaccgtgctcggtggcgccgggacgacggacggc
gcggtgggcggcgcgctcgcgttcgacggcgccgacgacgccgtacgactgccgtacgac
gggcggctgccgctcggggacggcgacttcacggcgtcgctgtggttccggtacacggcg
gccgacggggagcagccgctgctgtggatgggtggcatcggcaccacccagccccaggtg
tggctgcgcgccgagcccggcgacgggcgggtgcgggggctgatcaccgcacgcgagggc
gcggcggccccgcgttcggcctgggtggacaccgaccgggcgtacgacgacgggcggtgg
caccggctggcgctgcgccgcggcgggggccggctcacgctcttcgtggacggtgcgccg
gtggccggcacggcggacgtgccgggctccgtcagccgcgattcacccttcggggtgcac
atcggcgagcggatggacggccgggcccggttcaccggcgccgtcgacgacgtgcgggtg
tggaaacgggccctgaccgacgaggagatcgcggccggcgccccggcctccgccaccggg
aacccggtcctgcacctgcccatggaccgggtggaccggacggacgcgggcggctga
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