Streptomyces sp. BRB040: ABDE16_11595
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Entry
ABDE16_11595 CDS
T11010
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00300
Lysine biosynthesis
stbr00470
D-Amino acid metabolism
stbr01100
Metabolic pathways
stbr01110
Biosynthesis of secondary metabolites
stbr01120
Microbial metabolism in diverse environments
stbr01230
Biosynthesis of amino acids
Module
stbr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ABDE16_11595 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABDE16_11595 (lysA)
Enzymes [BR:
stbr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ABDE16_11595 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XAR10419
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All DBs
Position
complement(2661882..2663273)
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLPEGHYSAPADDLNALDPKVWAHTVGRDADGVVTVGGIAVTQLAE
EYGTPAYILDEADFRDRARAWRTAFGNDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGG
ELATALSAGMPAERIAFHGNNKSPEEIERAVRAGVGRIVLDSFQEIVRVAHIAQSLGTRQ
RVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDGLEVIGIHSHIGS
QIFDMSGFEVAAHRVVGLLRDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALT
EIVTRECEGARLRTPRISVEPGRAIVGPTAFTLYEVGTVKPLDGLRTYVSVDGGMSDNIR
TALYDAEYSVALASRTSDAEPMLVRVVGKHCESGDIVVKDAFLPGDLAPGDLIAVPATGA
YCRSMASNYNHVLRPPVVAVRDGAARVIVRRETEDDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcacaccccgccgggccccgtcacgccgatgtcctgcccgaagggcat
tactccgcgcccgcggacgatctcaacgccctcgatcccaaggtctgggcccacaccgtc
ggacgggacgcggacggggtcgtcaccgtcggcgggatcgccgtcacgcagctcgccgag
gagtacggcacccccgcctacatcctcgacgaggccgacttccgggaccgggcgcgggcc
tggcgcaccgccttcggcaacgacgccgacgtgttctacgccgggaaggcgttcctgtcg
cgcgccgtcgtgcggtggctgcatgaagaagggctcaacctcgacgtctgttccggcggc
gagctggccaccgcgctctccgccgggatgcccgccgagcggatcgccttccacgggaac
aacaagtcgccggaggagatcgagcgggccgtgcgcgccggggtggggcggatcgtgctc
gactccttccaggagatcgtgcgggtcgcgcacatcgcgcagtctctgggcacgcggcag
cgggtgcagatccggatcaccgtcggcgtcgaggcgcacacgcacgagttcatcgccacc
gcgcacgaggaccagaagttcgggatcccgctggccggcgggcaggcggcggaggcggtg
cggcgggcgctccagctcgacgggctcgaggtcatcgggatccactcgcacatcgggtcg
cagatcttcgacatgtcggggttcgaggtcgccgcgcaccgggtggtcgggctgctcagg
gacatccgggacgagcacggcgtcgagctgcccgagatcgacctcggcggcgggctcggc
atcgcgtacaccagtgacgacgacccccgcgagccgcacgagatcgccaaggcgctgacc
gagatcgtgacgcgggagtgcgagggtgcgcggctgcgcacgccgcggatctccgtcgag
cccgggcgggccatcgtcgggccgaccgccttcacgctctacgaggtcggcaccgtcaag
cccctcgacgggctgcggacctacgtctccgtcgacggcgggatgtcggacaacatccgc
accgcgctgtacgacgccgagtacagcgtcgctctcgcctcccgcacctccgacgccgag
ccgatgctcgtacgcgtcgtcggcaagcactgcgagagcggggacatcgtggtcaaggac
gccttcctgccgggggacctggcgcccggtgacctcatcgccgtaccggcgacgggggcc
tactgccgttccatggccagcaactacaaccacgtgctgcgcccgccggtcgtcgccgtg
cgggacggcgcggcacgggtgatcgtgcggcgggagaccgaggacgatctgctgcgtctc
gacgtcggatga
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