Streptomyces sp. BRB040: ABDE16_13410
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Entry
ABDE16_13410 CDS
T11010
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr03420
Nucleotide excision repair
stbr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABDE16_13410 (pcrA)
03430 Mismatch repair
ABDE16_13410 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stbr03400
]
ABDE16_13410 (pcrA)
Enzymes [BR:
stbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABDE16_13410 (pcrA)
DNA repair and recombination proteins [BR:
stbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABDE16_13410 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ABDE16_13410 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
XAR10762
UniProt:
A0AAU6XE10
LinkDB
All DBs
Position
complement(3087247..3089739)
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AA seq
830 aa
AA seq
DB search
MSSLFDDSFLASLQTPRGHEEEPPPPPEDDHGPEQVPHDLFGGKFDAPPERDTHYRDGAP
RPALDAAALLEGLNENQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAERSVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGVPSEHPVDVPPEAEVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNQGSGAQITGYVADTEHDEAQFVADEIDRLT
DAGEAKAGDVAVFYRTNAQSRVFEEIFIRTGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALKRVDEAYGMAARSANAVKR
FNTLMEDLRTIVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQEQAEGEEGGGTLADFLEKVALVADSDQIPDEEDGDGVVTLMTLHTAKGLEFPVVFLTG
MEDGVFPHMRALGQAKELEEERRLAYVGITRARERLYLTRSTLRSAWGQPSYNPPSRFLE
EIPAPHLEWKRTGANGPAPSAPVSGVAASLSSSRSRSSASGASGFATRRSTGAEQPAVSL
TVGDRVTHDQFGLGTVVGVKGTGSNAEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcgagcctccagaccccccggggtcacgag
gaggaacccccgccgccgcccgaggacgatcacggaccggagcaggttccgcacgatctg
ttcggcgggaagttcgacgcgcctccggagcgggacacccactaccgggacggcgccccg
cgccccgccctggacgccgcggccctcctggaggggctgaacgagaaccagcgcgccgcc
gtcgtccactccggctccccgctgctcatcgtggccggcgccggttccggcaagacccgc
gtgctgacccaccgcatcgcccacctgctggccgagcggagtgtccacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgccaacgcgatgtgggtgatgacgttccacagcgcgtgcgtgcgcatc
ctgcgccgcgagtcgaagaagctcggcttcacctcgtcgttctcgatctacgacgccgcc
gactccaagcggctcatggcgctggtctgccgcgacctggacctcgaccccaagcgcttc
ccgccgaagtcgttcagcgcgaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgccgacggtttcgagaagaccctcgcccaggcctacgcgatg
taccagtcgcggctgcgcgaggcgaacgccctcgacttcgacgacctgatcatgaccacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgccctggtgcgcgagctg
gtcggcgtcccctcggagcaccccgtcgacgtgccgcccgaggccgaggtgccgcccgcc
gagctgtgcgtggtgggcgacgccgaccagtcgatctacgccttccgcggcgccaccatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctcgagcag
aactaccgctccacgcagaccatcctcagcgccgccaacgcggtcatcgagcgcaacgag
tcccgccgccccaagaacctgtggaccaaccagggcagcggcgcccagatcaccgggtac
gtcgccgacaccgagcacgacgaggcacagttcgtcgccgacgagatagaccgcctcacc
gacgcgggcgaggccaaggccggggacgtcgcggtcttctaccggaccaacgcccagtcc
cgtgtcttcgaagagatcttcatccgcaccggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtgctggccaac
cccgaggactcggtgccgctgcgccgcatcctgaacgtccccaagcgcggcatcggcgac
cgtgccgaggcgatgatcgacgccctctcccagcgcgagaagatcagcttcccgcaggcg
ctgaagcgcgtcgacgaggcgtacgggatggccgcgcgctccgcgaacgccgtcaagcgg
ttcaacacgctcatggaggacctccgtacgatcgtcgagtccggcgccggaccggcgacc
gtcctcgaggcgatcctcgaacgcacggggtacctggcggagttgcaggcctccaccgac
ccccaggacgagacccgcatcgagaaccttcaggaactcgcggccgtcgccctggagttc
gagcaggagcaggccgagggtgaggaagggggcgggacactcgccgacttcctggagaag
gtcgcgctcgtcgccgactccgaccagatccccgacgaggaggacggcgacggcgtcgtc
accctgatgaccctgcacacggccaagggcctggagttcccggtcgtcttcctcaccggc
atggaggacggcgtcttcccgcacatgcgcgccctcggccaggccaaggagctggaggag
gaacggcgcctcgcctacgtcggcatcacccgtgcccgtgagcgcctctacctgacccgg
tcgacgctgcgcagcgcctggggccagccgtcctacaacccgccctcccggttcctggag
gagatcccggccccccacctggagtggaagcgcaccggggcgaacggccccgcgccctcc
gcgccggtctcgggggtggcggcctcgctgtcgtcgtcgcgttcccgctcctcggcgtcg
ggcgcgtcgggcttcgcgacccgcaggtcgaccggcgccgagcagcccgcggtctcgctg
acggtcggggaccgcgtcacgcacgaccagttcgggctcggcacggtggtcggggtcaag
ggcaccgggtccaacgcggaggcgacgatcgacttcggggacaccaagccgaagcggctg
ctgctgcggtacgcgccggtggagaagctctag
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