Streptomyces sp. BRB040: ABDE16_15000
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Entry
ABDE16_15000 CDS
T11010
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
stbr Streptomyces sp. BRB040
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
T7SS_signal
WXG100
RHS
Motif
Other DBs
NCBI-ProteinID:
XAR11060
LinkDB
All DBs
Position
complement(3411489..3416099)
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AA seq
1536 aa
AA seq
DB search
MAGHRPSDWHVLDLDKDPTPGDPQRVRTLAKTLHDFADDVSEALRLVKGMAGESTLAEWA
GKSATVFKDEFSGVPKNLKKLEKSYGMCGDALADFWPKLERAQALADKALIKAREARDDL
TSAQSKLSSADSWVTRASKEADKYKDDPTGSKSDADKPDEAKVRAATRDVQHAKTAQTNA
QSSVDSAQGALDAAKKMAADARKMRDDAAREAKNKIDEASDAGIQNRSWWEDVGDWFSDN
WDNIVAVCKVVVAIVGIIAMVIGGPILGAIVLVAALVVLADTLYKYSKGQASLWDVGLAA
LDCIPGMKGLTTLGALAKGAKNLGKLGLKGMAKGLGKGLRREADDAVAKGKPMDGRCKGG
DPIDMVSGEMLMEHTDVELPGLLPLVLRRTHVSTYASGRLFGPSWASTLDERLELDDEGA
SFASEDGMVLFYPIPAQGSSTMPLEGPRWPLDWDGGPSSPLRISDPVTGLTRHFAALARP
AASAEVFTLPLVAISDRNGHRIVIDRDDDGTPVAVRHSGGYHVHVDTEAGHVVRLRLRDP
DTGTDGVTLLRYAFDEDGNLNEIHNSSGLAFRMTYDSRARITSWTDRNGGWFRYSYDHFD
RCVRAEGADGILSCGITYDTEARETRYTNSLGHTTVHRYNELLQRTELVDALGRTIRTAW
DRYDRPVSRTDSLGRTTTFEYDESGSLRSVTRPDGRRTTAQYNELNLPVRVVEPDGAVWE
QSFDARGNRLKITDPTGSSRQYSYDEQGRLTAVVDALGHMTRTTCDPAGLTIVHTDALGH
TTRAERDAFGRVCVVTDAEGDTERMGWTVEGHPAWRVAADGSRESWEWDGEGNLVAHVDP
TGHRSSIRTKYFHQPAVRTDANGREYRFTYDTELNLTRVTNAQGDTWEYVYDPVNRLTAE
TDFEGRTVTYAHDDAGRLIGSTNGNGEETTFVRDELGRVVTRRAGGRVTRYAYDPVGRLR
HAATDESTLERAYDPAGRLVREVLDGAVTTYVHDSMGRRIRRSTPSGIVSTWSYDALGRP
AALDAAGHSVTFDFDSRGREQTRAYGGFAELTQTWDSRGRLAGQRLHGCDPRGGRTLLQE
RAYTHRADGVVSGISELTTGSRTLDLDTVGQVTTVRGSNWAESYTYDALGNVRQSVTPAG
GEEPVTREYRSTRLLRSGRTRYEYDGQGRPVRTVKRLLNGQKRVSVFTWDAQDRLTAVLT
PAGDTWNYRYDPTGRRCAKVRLGPGGEVAEETRFTWDGTRVAEQAEADGSTTSWDYFSGT
HRPLTHIRKAVTGEVRFHGVVTDTVGASTELVDEAGALAWHRRSELWGRDLPDARDEQAS
SGDVDCPLRFPGQYADAETGWHYNFARYYDPENGRYLTPDPLGLAPQPNHYGYVPNPLLF
VDPLGLARMRDKKGRYASDPDAPATRHNRSSEYPHEYWDSTHEDMVTRFTDEGRTAGGWP
VDPVTKQRIPRDQLTWRNNAGEIVDADPKVLTYDHKPRVVEHWNSTGYNTDYAAREAWYN
DTTEMEPMTRADNGRDGAKAPEYRQDTGPSYKCRGA
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccacaggccgagtgactggcatgtcctggacctggacaaggacccgaccccg
ggggacccgcagcgggtgcgcacgctcgcgaagacgctgcacgacttcgccgacgacgtc
tccgaggcgttgcgtctggtgaagggaatggcgggggagtccacgctcgcggagtgggcg
gggaagtcggcgacggtcttcaaggacgagttctccggtgtgccgaagaacttgaagaag
ctggagaagtcgtacgggatgtgcggcgacgcgctcgcggacttctggccgaagctggag
cgggcgcaggcgctggcggacaaggccctcatcaaggcgcgggaggcccgtgacgacctc
acgtccgcgcagtcgaagctgtcctcggcggactcgtgggtgacgcgggcgtcgaaggag
gcggacaagtacaaggacgacccgacgggcagcaagtccgacgcggacaagccggacgag
gcgaaggtccgcgccgccacccgtgacgtccagcacgccaagaccgcgcagaccaacgcg
cagtcgtcggtcgactccgcgcagggtgcgctggacgcggcgaagaagatggcggcggac
gcgcgcaagatgcgtgacgacgcggcccgggaggccaagaacaagatcgacgaggcgtcc
gacgccggcatccagaaccggtcctggtgggaggacgtcggcgactggttctccgacaac
tgggacaacatcgtcgcggtctgcaaggtcgtcgtcgccatcgtcggcatcatcgcgatg
gtcatcggcgggccgatcctcggcgcgatcgtgctggtcgcggcactggtcgtgctcgcg
gacacgctctacaaatacagcaaagggcaagcgtccctgtgggacgtggggttggccgcg
ctggactgcatccccggcatgaagggcctgaccaccctaggagcgctggcgaagggagcg
aagaacctcggcaagctgggtctcaaaggcatggccaaaggacttggtaaagggctgcgt
cgtgaagccgacgacgcagtcgccaagggcaagccgatggacggccgctgcaagggtggt
gaccccatcgacatggtgtccggcgagatgctcatggagcacaccgatgtcgagttgccc
ggcctccttccactggttctgcgcagaacccacgtttcgacctacgcgtcagggcggttg
ttcgggccctcctgggcatccacgctggacgagcgcctggaactggacgacgagggtgcg
agtttcgcctcggaggacgggatggtcctcttctacccgatccccgcgcagggcagttcc
acgatgcccttggaggggccccgctggccgctggactgggacggcggtcccagctcccct
ctgcggatctccgatccggtcaccggtctgacccggcacttcgccgcgctcgctcgccca
gccgcatccgcggaggttttcaccctccccctagtcgccatctcggaccggaacgggcac
cgcatcgtcatcgaccgggatgacgacggcacgcctgtcgcggtccggcactccggcggc
tatcacgtacacgtcgacacggaggcgggtcacgtcgtccgcctgagactccgcgatccg
gataccggtaccgatggggtgaccctgctccggtacgccttcgacgaagacggcaacctg
aacgaaatccacaactccagcggtcttgcgttccgcatgacctacgactcccgggcgcgc
atcacgtcatggactgaccggaacgggggctggttccgctactcgtacgaccacttcgac
cggtgcgtccgagcggagggcgccgatggcattctgagctgtgggatcacgtacgacacg
gaggcccgggagactcgttacaccaactctctcggtcatacgacggtccatcgctacaac
gaactcctgcagcggaccgaactcgtcgacgccctcggccgtaccatccgcacggcgtgg
gaccgctacgaccggcccgtttcccgcaccgactccctcgggcgtaccaccacgttcgag
tacgacgaatccggcagcctgcggtcggtcactcgccccgacggccgtcgtaccacggcg
cagtacaacgaactgaacctaccggtccgggtggttgagccggacggtgcagtgtgggaa
cagtccttcgacgcgcgtggcaaccggctgaagatcacggacccgacaggcagctcccgg
cagtacagctacgacgaacagggtcggctcaccgccgtggtcgacgccctggggcacatg
acccgcaccacgtgcgacccggcaggactcacgatcgttcacaccgacgctctcgggcac
accactcgcgccgaacgggacgctttcgggcgcgtctgcgtcgtgaccgacgcggaaggc
gacaccgagcgcatgggctggaccgtggaagggcacccggcctggcgcgtcgctgcggac
ggcagccgggagagctgggaatgggatggcgagggcaatctcgtcgcccacgtggatccg
acggggcaccgatcgtcgatcaggaccaagtacttccaccaaccggcggtccgcaccgat
gcgaacggccgagagtaccggttcacctatgacaccgagctgaacctcacccgggtcacc
aacgcacagggtgacacctgggagtacgtgtacgacccggtcaatcgactcaccgcagag
acggatttcgaggggcgcacggtcacctacgctcacgacgacgccgggcgactcatcggc
agcaccaacggcaacggcgaggagaccaccttcgtccgggacgaactgggcagagtcgtc
acacgacgagcaggtggccgggtcacccggtacgcctatgatcccgtcggccggctccgc
cacgccgccacagacgagagcaccctggagcgagcgtacgaccccgctgggcgcctcgtc
cgcgaagtgctcgacggcgccgtgaccacctatgtccacgactccatggggcgccggatc
cggcggagcacgcccagtggcatcgtctccacgtggagctacgacgccctggggcgtcct
gccgctctcgacgccgccgggcattcggtgaccttcgacttcgactctcgcggccgggaa
cagacacgggcgtacggcggcttcgccgaactcactcagacgtgggacagcagagggcgc
ctcgccgggcagcgtctccacggctgcgacccccggggaggccggactcttcttcaggaa
cgcgcctacacacaccgggcggacggcgtggtgtccggaatcagcgaactcaccacgggc
agccgcacccttgacctcgacaccgtcggccaggtcacaaccgtgcggggcagcaactgg
gccgaaagctacacgtacgacgccctgggcaatgtccggcagtcggtaacaccggcgggc
ggcgaggagccggtgacacgggagtaccggagtaccaggctgctgcgctccgggcgcacc
cggtacgagtacgacgggcaagggcggcccgtccgtaccgtgaagagactgctcaacggg
cagaaacgagtgtccgtcttcacctgggacgcccaggaccggctcactgcggtgctcaca
ccggcgggggacacctggaactaccggtacgaccccaccggacgccgctgcgccaaggtc
cggctggggcctggaggcgaggtggccgaggagacacggttcacctgggacgggacgcgc
gtggccgagcaggcagaggccgatgggagcacgacttcctgggactacttctccggcact
caccgcccgctgacacacatacgcaaggcggtgacgggcgaggtcaggttccatggcgtc
gtcacggacaccgtgggagcctcgacggagcttgtcgacgaggcaggcgcgctggcgtgg
caccgcaggtccgagttgtggggacgggaccttccggacgcccgggacgagcaggcgtcc
agtggtgacgtcgactgccctctgcggttccccggtcagtacgccgacgcggagaccggc
tggcactacaacttcgcccggtactacgacccggagaacggccgttacctcacccccgac
ccgcttggtctcgcccctcagcccaatcactacggctacgtgcccaacccgctgctcttc
gtcgacccgctgggcctggcccggatgcgcgacaagaagggtaggtacgcgagcgacccg
gacgctcccgcaacccggcacaaccgttcctccgagtatccgcacgaatactgggactcg
acgcacgaggacatggtcacccgattcacagatgaagggcgtaccgcaggtggctggcct
gtcgatccagttactaaacagagaattccgcgggaccagcttacttggcgcaacaatgcc
ggagaaattgtggacgcggatccgaaggttcttacgtacgatcacaagccgcgtgtggtt
gagcactggaacagcaccggatacaacactgattatgcggcacgcgaagcttggtacaat
gacacgaccgagatggagcctatgactcgggcagacaatggtcgcgacggagcaaaagca
cccgaataccgtcaggacactggccccagttataagtgcagaggagcttag
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