Streptomyces sp. BRB040: ABDE16_16305
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Entry
ABDE16_16305 CDS
T11010
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
stbr Streptomyces sp. BRB040
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stbr03400
]
ABDE16_16305 (radA)
DNA repair and recombination proteins [BR:
stbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABDE16_16305 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
ChlI
AAA_16
Lon_C
AAA_22
DnaB_C
nSTAND_NTPase5
nSTAND3
AAA_14
PAXNEB
AAA
NACHT
AAA_24
SLFN-g3_helicase
ABC_tran
NTPase_1
AAA_30
DUF7129
RecA_N
Rad51
MMR_HSR1
AAA_5
AAA_29
AAA_18
ATPase_2
MCM
GvpD_P-loop
NB-ARC
RsgA_GTPase
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
XAR11302
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All DBs
Position
3690745..3692154
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AA seq
469 aa
AA seq
DB search
MAARTKSAKERPSYRCTECGWQTAKWLGRCPECQAWGTVEEYGAPAVRTTTPGRVTTSAV
PIGQVDGRQATARSTGVPELDRVLGGGLVPGAVVLVAGEPGVGKSTLLLDVAAKSASDEH
RTLYVTGEESASQVRLRADRIHAIDDHLYLAAETDLAAVLGHLDAVKPSLLILDSVQTVA
SPEIDGAPGGMAQVREVAGALIRASKERGMSTLLVGHVTKDGAIAGPRLLEHLVDVVLHF
EGDRHARLRLVRGVKNRYGTTDEVGCFELHDEGITGLADPSGLFLTRRAEPVPGTCLTVT
LEGRRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRGRISALGKRDIYSAT
VGGVKLSEPAADLAVALALASAASDTPLPKNLVAIGEVGLAGEVRRVTGVQRRLSEAHRL
GFTHALVPADPGRVPDGMKVLEVADMGDALRVLPRSRRREAPRDEGDRR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgtacgaagtccgccaaggaacggccgtcctaccgctgcaccgagtgcggc
tggcagacggccaagtggctcggccgctgccccgaatgccaggcgtggggcacggtcgag
gagtacggcgcgcccgcggtgcgcacgaccacgccggggcgcgtgaccacgtccgcggtg
ccgatcgggcaggtcgacggacggcaggcgaccgcccgctccaccggcgtgcccgagctg
gaccgggtgctcggcgggggtctggtgcccggagccgtggtgctggtcgcgggtgagccg
ggcgtcggcaagtccacgctgctcctcgacgtggcggccaagtccgcgagcgacgagcac
cggacgctctatgtcaccggtgaggagtcggcgagccaggtgcggctgcgggccgaccgg
atccacgccatcgacgaccatctgtacctcgccgccgagaccgacctcgccgcggtgctc
gggcacctggacgccgtgaagccgtcgctgctgatcctggactccgtgcagacggtggcc
tcccccgagatcgacggtgccccgggcggcatggcccaggtgcgggaggtcgcgggcgcg
ctgatccgggcctccaaggagcgcggcatgtccacgctcctcgtgggccacgtcaccaag
gacggggccatcgccgggccccggctgctcgagcacctggtggacgtcgtgctgcacttc
gagggcgaccggcacgcgcggctgcggctggtgcggggcgtcaagaaccggtacgggacg
acggacgaggtcggctgcttcgagctgcacgacgaggggatcaccgggctcgccgacccc
agcgggctgttcctcacccggcgggccgagccggtgcccggcacctgtctgaccgtcacc
ctggaggggcgccggccgctggtcgccgaggtgcaggcgctgaccgtcgactcgcagatc
ccctccccccggcgcacgacctccgggctcgagacctcgcgggtgtcgatgatgctggcc
gtgctcgagcagcgcggccgcatcagcgccctgggcaagagggacatctacagcgcgacg
gtcggcggcgtgaagctctccgagccggccgccgacctcgccgtcgcgctggcgctggcg
agtgcggccagtgacaccccgctgcccaagaacctcgtcgcgatcggcgaggtcggcctc
gccggagaggtgagacgggtcacgggggtgcagcgcaggctctccgaggcgcaccggctg
ggcttcacgcacgccctggtaccggccgatccgggcagggtccccgacggcatgaaggtc
ctggaagtcgcggacatgggagacgccctgcgggtgcttccgcgctcgcgtcgccgagag
gccccacgggacgagggggaccgccggtag
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