Streptomyces sp. BRB040: ABDE16_16585
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Entry
ABDE16_16585 CDS
T11010
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00550
Peptidoglycan biosynthesis
stbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABDE16_16585 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stbr01002
]
ABDE16_16585 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stbr01011
]
ABDE16_16585 (dacB)
Enzymes [BR:
stbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ABDE16_16585 (dacB)
Peptidases and inhibitors [BR:
stbr01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
ABDE16_16585 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
stbr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ABDE16_16585 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Peptidase_M17_N
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
XAR11354
LinkDB
All DBs
Position
complement(3753557..3755107)
Genome browser
AA seq
516 aa
AA seq
DB search
MARAADAVRPRLARFARATGPRVTRFARATAPRLTRITRPKTWQYTAGAATAGLALAAGV
VTAAGPWDSTGQRTAERDRAVALDHTGGADHGRGAGASGTAPGSPRPAPSAGAVLTGLGG
TSTPGGVKAAPGTENLADLLDPLLKDDPGLGEHRAAAVVDLTTGKRLYGLDSDAALTPAS
TTKIATAVAALTAMGPDHRLTTRTALEPDTGELVLVGGGDPTLTAREDAHGLASLRTLAE
KTATALKRRDVRKVTLSYDTTLYAGTDLHPIGVNENLARVTALMADEGRTDDSTSGPAPR
VPDPADAAARTFADLLEQHGITASPPGPSKATGRATTLATVSSPPLSALVERMLTNSDND
LAEALARHTAAATGKRADFAGAGAAVTARLKQLGLPVDGARFHDGSGLDRTDLITPGLLT
ALLTEAADPARPQLRAVLTGLPVAHFTGTLAGRYTDGAAGLVRAKTGTLTGVNTLAGTVT
TPDGHVLGFAFLTNATTDPWTAQTTLDRAATALALP
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgggccgcggatgccgtacgtccccgtctggcccgctttgcccgggccaccgga
ccgcgggtcacacggttcgcacgggccacggcgccacggctcacccggatcacgaggccg
aagacctggcagtacaccgccggtgccgccaccgccggactggcactggccgccggtgtg
gtgaccgccgccggcccctgggactccacgggtcagcgtacggccgagcgggaccgggcc
gtcgcactggaccacacgggtggcgcagatcacggccgcggagccggggcctccggtacg
gcgcccggttcgccccgtcccgcgcccagcgccggggccgtgctgaccggtctgggcggc
accagcacgccgggcggcgtcaaggcggcacccggcaccgagaacctcgcggacctcctc
gacccgctgctcaaggacgaccccgggctcggcgagcaccgcgcggccgccgtcgtcgac
ctcaccaccggcaagcgcctgtacggcctcgactccgacgccgccctcacccccgcctcc
accaccaagatcgccaccgccgtcgccgccctcaccgccatgggccccgaccaccgcctc
accacccgcaccgccctggagcccgacaccggcgaactcgtcctggtcggcggcggcgac
cccaccctcaccgcccgcgaggacgcccacgggctcgcgagcctgcgcaccctcgccgag
aagaccgccaccgccctgaagaggcgcgacgtgcgcaaggtgacgctgtcgtacgacacg
acgctctacgccggcacggacctgcacccgatcggcgtcaacgagaacctggcccgcgtc
accgcgctgatggccgacgagggccgcaccgacgactccaccagcggccccgccccgcgc
gtccccgacccggcggacgccgccgcccgcaccttcgcggacctcctggagcagcacggc
atcaccgcctcgccccccggcccctccaaggccacgggccgcgccaccaccctcgccacc
gtctcctcgcccccgctgtcggccctcgtcgagcggatgctgaccaacagcgacaacgac
ctcgccgaggccctggcccgccacaccgccgcggcgaccggaaaacgcgccgacttcgcc
ggggcgggagccgccgtcacggcccgcctgaagcagctcggcctgccggtggacggagcg
cggttccacgacggaagcggcctcgaccgcaccgacctgatcacccccggcctgctcacc
gccctgctgaccgaggcggccgaccccgcccgcccccagctccgcgcggtgctcaccggc
ctccccgtcgcccacttcaccggcacactggccggccgttacacggacggcgcagcgggc
ctcgtccgcgccaagaccggcaccctcaccggcgtgaacaccctcgccggcacggtcacc
acccccgacggccacgtcctcggcttcgccttcctgaccaacgccacgacggacccatgg
acagcccagacaaccctggacagagcggcgacggcgctggcgcttccgtaa
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