Streptomyces sp. BRB040: ABDE16_17555
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Entry
ABDE16_17555 CDS
T11010
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABDE16_17555 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stbr01007
]
ABDE16_17555 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stbr03016
]
ABDE16_17555 (aspS)
03029 Mitochondrial biogenesis [BR:
stbr03029
]
ABDE16_17555 (aspS)
Enzymes [BR:
stbr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
ABDE16_17555 (aspS)
Amino acid related enzymes [BR:
stbr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABDE16_17555 (aspS)
Transfer RNA biogenesis [BR:
stbr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABDE16_17555 (aspS)
Prokaryotic type
Other AARSs
ABDE16_17555 (aspS)
Mitochondrial biogenesis [BR:
stbr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
ABDE16_17555 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XAR11532
UniProt:
A0AAU6XKI6
LinkDB
All DBs
Position
complement(4008833..4010596)
Genome browser
AA seq
587 aa
AA seq
DB search
MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHHGITQLVARPGTEAYA
ALDKLTKESTVRVDGKVVSRGADNINPDLPTGEVEVEVGEVELLGAAQPLPFTINTEDGV
NEERRLEYRFLDLRRERMHRNIMLRTSVISAIRHKMVTLGFNEMATPILTATSPEGARDF
VVPSRLHAGRFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVEQEDVFQPIERLMTELFTEFGNGREVTSPFPRIPFREAMLKYGSDKPDLRAQLELV
DITDVFEGSEFKAFAGKHVRALPVPDVSAQPRKFFDQLGDYAVSQGAKGLAWVRVGEDGK
LSGPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVEAAKRAGHFEEN
VFRFCWIVDFPMYEKDEETGRIDFSHNPFSMPQGGMDALENQDPLDILAWQYDIVCNGVE
LSSGAIRNHEPEIMLKAFEIAGYDAETVEREFAGMLRALRFGAPPHGGIAPGVDRIVMLL
ADEPNIRETIAFPLNGNAQDLMMGAPTELDETRLRELHLTVRKPQPK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtacaggtcccacacctgcggcgagctccgctcctctgacgtcggcaccgac
gtccgactgagtggctggctgcacaatcggcgcgacctgggcggcatcctcttcatcgat
ctgcgcgatcaccacggcatcacgcagctcgtcgcccgtccgggcaccgaggcctacgcg
gcgctggacaagctgaccaaggaatcgaccgttcgggtcgacggcaaagtcgtctcccgc
ggcgccgacaacatcaaccccgacctgcccaccggcgaggtcgaggtcgaggtgggcgag
gtcgagctgctcggcgccgcccagccgctgcccttcaccatcaacaccgaggacggggtc
aacgaggagcggcgcctggagtaccgcttcctggacctgcgccgcgagcgcatgcaccgc
aacatcatgctgcgcacctcggtcatctccgccatccggcacaagatggtgaccctcggc
ttcaacgagatggcgacgcccatcctcaccgccacctcccccgagggcgcccgcgacttc
gtggtcccctcccgcctgcacgcgggccgcttctacgccctgccgcaggcgccgcagcag
ttcaagcagctgctgatgatctcgggcttcgaccggtacttccagatcgcgccctgcttc
cgcgacgaggacgcccgcgccgaccgctcgccgggcgagttctaccagctcgacgtcgag
atgagcttcgtcgagcaggaggacgtcttccagccgatcgagcggctcatgacggagctg
ttcacggagttcggcaacggccgcgaggtgacgtctccgttcccgcgcatcccgttccgc
gaggcgatgctgaagtacggctccgacaagccggacctgcgcgcccagctggagctggtc
gacatcaccgacgtcttcgagggctcggagttcaaggccttcgccggcaagcacgtgcgc
gcgctgcccgtccccgacgtctcggcgcagccccgcaagttcttcgaccagctcggcgac
tacgccgtctcgcagggcgccaagggtctggcctgggtccgcgtcggcgaggacggcaag
ctgtccggcccgatcgcgaagttcctcaccgaggagaacgttgcggagctgaccaagcgg
ctctcgctggccgccggccacgcggtgttcttcggcgcgggcgagttcgacgaggtctcc
aagatcatgggcgcggtccgcgtcgaggccgccaagcgcgccggccacttcgaggagaac
gtcttccgcttctgctggatcgtcgacttcccgatgtacgagaaggacgaggagacgggg
aggatcgacttctcccacaacccgttctcgatgccgcagggcggcatggacgccttggag
aaccaggacccgctggacatcctcgcctggcagtacgacatcgtctgcaacggcgtcgag
ctgtcctccggcgcgatccggaaccacgagccggagatcatgctcaaggccttcgagatc
gcgggctacgacgcggagaccgtcgagcgcgagttcgccggcatgctgcgcgccctccgc
ttcggcgccccgccccacggtggcatcgcccccggcgtcgaccgcatcgtcatgctgctg
gccgacgagcccaacatccgcgagaccatcgccttcccgctcaacggcaacgcccaggac
ctgatgatgggcgccccgaccgagctggacgagactcggctgagggaactgcacctgacg
gtgcgcaagccacagccgaagtag
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