Streptomyces sp. BRB040: ABDE16_18115
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Entry
ABDE16_18115 CDS
T11010
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
stbr Streptomyces sp. BRB040
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stbr03032
]
ABDE16_18115
03400 DNA repair and recombination proteins [BR:
stbr03400
]
ABDE16_18115
Enzymes [BR:
stbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABDE16_18115
DNA replication proteins [BR:
stbr03032
]
Prokaryotic type
DNA Topoisomerases
ABDE16_18115
DNA repair and recombination proteins [BR:
stbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABDE16_18115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
HALZ
Motif
Other DBs
NCBI-ProteinID:
XAR11639
UniProt:
A0AAU6XI71
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Position
4134129..4136585
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AA seq
818 aa
AA seq
DB search
MARRSTKTPPPDDAYEEKILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRIV
YQMNEMGLRPERGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRVPLVDGHGNF
GSLGNDDPPAAMRYTECRMAEAAGLMTESIDEDTVDFAPNYDGQEQEPVALPAAFPNLLV
NGASGIAVGMATNMPPHNLREVIAAARHLIRNPNADLDALMKHVPGPDLPTGGRIVGLPG
IRDAYETGRGTFKIRATVSVETVTARRKGLVVTELPFAVGPEKVISKIKDLVGSKKLQGI
ADVKDLTDRAHGLRLVIEIKNGFVPEAVLEQLYKLTAMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFTVVRRRSEFRRSKKRDRLHLVEGLLTALVDIDEVIRLIRSSENSAQAKQ
RLMERFALSDVQTQYILDTPLRRLTKYDRIELESEKDRLNAEIQELTRILDSDAELRKLV
SAELAAVAKKFGTDRRTTLLESGGAPVAAVPLQVADDPCRVLLSSTGLLARTANGEPLVT
EAGAKRVKHDLIVSAVPATARGEVGVVTTAGRLLRVNVVDLPQLPEAMPTPNLAGGAPLA
EFVSLDDDEDVVCLTTLDESSPGLALGTEQGVVKRVVPDYPSHKDELEVISLREGDRIVG
GVELRTGDEDLVFITDDAQLLRYQASQVRPQGRPAGGVAGVKLADGAKVISFTAVDPAAD
AVVFTVAGSRGTLDDSVQTTAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLAFAWAGAVP
ALAAQKNGTPAQLPEIDPRRDGSGVSLPKTVSVVAGPV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgtagtacgaagaccccgccgcccgacgacgcgtacgaggagaagatcctc
gacatcgacgtcgtcgacgagatgcagggctccttcctcgagtacgcgtactcggtcatc
tactcccgtgcgctgccggacgcccgcgacggcctcaagccggtgcaccggcgcatcgtc
taccagatgaacgagatgggcctgcggcccgagcgcggttacgtgaagtgcgcccgcgtc
gtcggcgaggtcatgggcaagctgcacccgcacggcgacgcgtcgatctacgacgcgctg
gtgcgcatggcccagccgttctcgatgcgcgtgcccctggtggacggccacggcaacttc
ggctcgctgggcaacgacgacccgccggccgccatgcggtacaccgagtgccggatggcc
gaggccgccggactgatgacggagtccatcgacgaggacaccgtcgacttcgcccccaac
tacgacggccaggagcaggaaccggtggcgctgcccgccgctttcccgaacctgctggtc
aacggtgcctcgggcatcgcggtcggcatggccaccaacatgccgccgcacaatctgcgc
gaggtgatcgcggcggcccggcacctgatccggaatccgaacgccgacctggacgcgctg
atgaagcacgtgccgggtcccgacctgcccaccggcggacgcatcgtcggcctgcccggc
atccgggacgcgtacgagacggggcggggcacgttcaagatccgcgcgacggtgtccgtg
gagacggtgacggcccgccgcaagggtctcgtcgtcaccgagctgcccttcgcggtcggc
cccgagaaggtcatctcgaagatcaaggacctggtcggctcgaagaagctccagggcatc
gcagacgtcaaggacctcaccgaccgcgcgcacgggctgcgcctggtcatcgagatcaag
aacggcttcgtgccggaggcggtcctggagcagctctacaagctgacggccatggaggag
tccttcggcatcaacaacgtcgccctggtggacggccagccgctcaccctgggcctcaag
gaactgctggaggtctatctcgaccaccggttcaccgtcgtcaggcgccgcagcgagttc
cgccgcagcaagaagcgggaccggctgcacctggtggagggcctgctcaccgccctggtc
gacatcgacgaggtcatccgtctcatccgctccagcgagaactccgcgcaggccaagcag
cgcctgatggagcgcttcgcgctgagcgacgtccagacgcagtacatcctggacacgccg
ctgcgccggctcaccaagtacgaccgcatcgagctggagtccgagaaggaccggctgaac
gcggagatccaggagctgacccggatcctcgactcggacgcggagctgcgcaagctggtc
tcggccgaactggcggcggtggcgaagaagttcggcaccgaccgccgcacgacgctgctg
gagtcgggcggtgccccggtcgccgccgtgccgctccaggtggcggacgacccgtgccgg
gtgctgctgtcgtcgacggggctgctggcccgcacggcgaacggtgagcccctggtcacg
gaggcgggggccaagcgggtcaagcacgacctgatcgtctccgcggtaccggccaccgcg
cgcggcgaggtcggcgtggtgacgaccgccggccgcctgctgcgggtgaacgtggtggac
ctcccccagctcccggaggccatgcccacgccgaacctcgcgggcggcgcaccgctggcg
gagttcgtgtccctggacgacgacgaggacgtcgtctgcctgaccacgctggacgagtcc
tcgccggggctggcgctcggcacggaacagggcgtcgtcaagcgggtggtgcccgactac
ccgtcccacaaggacgagctggaggtcatctccctcagggagggcgaccgcatcgtcggc
ggggtcgagttgcgcaccggtgacgaggacctggtcttcatcacggacgacgcccagctg
ctgcgctaccaggcctcgcaggtccggccgcagggccgtccggcgggcggtgtggcgggc
gtcaagctcgccgacggcgccaaggtcatctccttcacggcggtggatccggcggcggac
gcggtggtcttcacggtggccggatcgcgcggcacgctggacgactccgtgcagaccacg
gccaagctgacgccgttcgaccagtatccgcgcaagggccgcgccacgggcggtgtgcgc
tgccagcggttcctgaagggcgaggactgcctggccttcgcctgggcgggtgccgtcccg
gccctcgccgcacagaagaacggcacaccggcccagctcccggagatcgacccgcgccgt
gacggctcgggcgtgtcgctgccgaagacggtgtcggtggtggcgggcccggtctag
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