Streptomyces sp. BRB040: ABDE16_19860
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Entry
ABDE16_19860 CDS
T11010
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00900
Terpenoid backbone biosynthesis
stbr01100
Metabolic pathways
stbr01110
Biosynthesis of secondary metabolites
Module
stbr_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ABDE16_19860 (ispF)
Enzymes [BR:
stbr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
ABDE16_19860 (ispF)
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Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
XAR11948
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All DBs
Position
4481351..4481878
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AA seq
175 aa
AA seq
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MGSEATGSETGEQQQPLLLPQVGIGTDIHAFEDGRELWCAGLKWEGEGPGLAGHSDADVV
AHAACNALFSAAGLGDLGQHFGTGRPEWSGASGVTLLTEAARIVRNGGFRIGNVAVQVVG
ARPKLGKRRDEAEAVLSAAVGAPVSVSGATTDGLGFPGRGEGLMAVATALVVRVP
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgaggcgaccggttctgagacgggcgagcagcagcagccgctgctgttgccg
caggtcgggatcggtacggacatccacgccttcgaggacgggcgcgagctgtggtgcgcc
gggctgaagtgggagggcgagggtcccgggcttgccgggcactccgacgcggacgtcgtc
gcgcacgcggcgtgcaacgcgttgttctcggcggcagggctcggggatctcgggcagcac
ttcggcaccgggcggccggagtggtccggcgcgtccggggtgacgctgctgacggaggcg
gcgcggatcgtgcggaacggggggttccggatcgggaacgtggcggtgcaggtggtgggg
gcgcggccgaagctcggcaagcggcgggacgaggcggaggcggttctctccgcggcggtg
ggggcgccggtgtccgtgtcgggggcgacgacggacgggctcgggtttcccgggcggggg
gaggggctgatggcggtggccacggcgttggtcgtgcgggtgccctag
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