Streptomyces sp. BRB040: ABDE16_20725
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Entry
ABDE16_20725 CDS
T11010
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00521
Streptomycin biosynthesis
stbr00523
Polyketide sugar unit biosynthesis
stbr00525
Acarbose and validamycin biosynthesis
stbr00541
Biosynthesis of various nucleotide sugars
stbr01055
Biosynthesis of vancomycin group antibiotics
stbr01100
Metabolic pathways
stbr01110
Biosynthesis of secondary metabolites
stbr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ABDE16_20725 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ABDE16_20725 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ABDE16_20725 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ABDE16_20725 (rfbB)
00525 Acarbose and validamycin biosynthesis
ABDE16_20725 (rfbB)
Enzymes [BR:
stbr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ABDE16_20725 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
XAR12110
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All DBs
Position
complement(4669065..4670045)
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AA seq
326 aa
AA seq
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MKILVTGGAGFIGSHYVRTMLDGGYPEFEDAHVTVLDALTYAGNRDNLPAAHPRLSFVHG
NILDRDLLRTLLEGQDAVVHFAAESHVDRSIAGGAVFVRTNVEGTQALLEACLAAGVGRV
VHVSTDEVYGSIEEGEWTEESPLLPNSPYAASKAASDLVALAYVRTHRLNLSVTRCSNNY
GPYQHPEKFIPLAVTNLLEGRPIPVYGDGGQVREWLHVDDHCRAVHRVLTRGGAGEVYNI
GAGTAVPNLALAHRLAELCGAEPDMVRHITDRKGHDRRYALDQSKIERELGHRPLTAFDA
GLADTVAWYRDNPRWWKPVKDSGGRP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgtcaccggcggcgccggattcatcggctcgcactacgtacggaccatg
ctcgacggcggatatccggaattcgaggacgcgcacgtcacggtcctggacgcgctgacc
tacgcgggaaaccgcgacaacctccccgccgcgcacccgcggctgagcttcgtgcacggg
aacatcctcgaccgggacctgctgcgcaccctcctcgagggccaggacgcggtggtccac
ttcgcggccgagagccacgtcgaccgctcgatcgcgggcggcgcggtgttcgtccgcacc
aacgtggagggcacccaggcgctgctcgaggcctgtctggccgccggtgtcggccgggtg
gtgcacgtgtcgacggacgaggtgtacggctccatcgaggagggcgagtggaccgaggag
tccccgctccttcccaactcgccctacgccgcgtccaaggcggcctccgacctggtcgcc
ctggcgtacgtccgcacccaccggctgaacctctcggtcacccgctgctccaacaactac
ggcccctaccagcaccccgagaagttcatcccgctcgccgtcaccaacctgctcgaggga
cgccccatccccgtctacggggacggcggccaggtccgcgagtggctgcacgtggacgac
cactgccgggcggtgcaccgggtgctcacccggggcggggcgggcgaggtctacaacatc
ggggccggcacggccgtaccgaacctggccctggcccaccggctcgccgaactgtgcggg
gccgagccggacatggtccggcacatcaccgaccgcaagggccacgaccggcgctacgcc
ctggaccagtcgaagatcgagcgggaactcggccaccggccgctgaccgccttcgacgcg
gggctggccgacaccgtggcctggtaccgggacaacccccgctggtggaagccggtcaag
gacagcggcggccggccgtga
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