Streptomyces sp. BRB040: ABDE16_23570
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Entry
ABDE16_23570 CDS
T11010
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00061
Fatty acid biosynthesis
stbr00071
Fatty acid degradation
stbr01100
Metabolic pathways
stbr01212
Fatty acid metabolism
stbr02024
Quorum sensing
stbr04146
Peroxisome
Module
stbr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABDE16_23570
00071 Fatty acid degradation
ABDE16_23570
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABDE16_23570
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABDE16_23570
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stbr01004
]
ABDE16_23570
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stbr04147
]
ABDE16_23570
Enzymes [BR:
stbr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABDE16_23570
Lipid biosynthesis proteins [BR:
stbr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABDE16_23570
Exosome [BR:
stbr04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABDE16_23570
Exosomal proteins of breast cancer cells
ABDE16_23570
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Paralog
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Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XAR12631
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Position
5310447..5312375
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AA seq
642 aa
AA seq
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MGVRRDLKRARDRGDLASRTRTETVTDAGGTVREARTAPLAPRPTEGSTADIPFTNAAEA
PGAVVLRRQVDDAWRPVTAAEFAREVTAVAKGLVAAGLEPGGRVAVMSRTRYEWTVLDFA
VWAAGGQTVPVYATSSADQVEWIVRDSGARHVVTETAANTATVLTGTAGHAEHPRVWELD
AGALADLTALGLGVSDEEVTKRRTALTPDAVATVCYTSGTTGRPKGCVLTHANLHAEAAN
TVELLHPIFKEVTGQTASTLLFLPLAHILGRTIQIACLLARIEIGHFPSIKPDELRPALK
SFRPTFLVGVPYLFEKIHDTGRATAEKIGRGASFERAHRLAVRFGAAHLERFLGRGKGPT
LGLWAGWALYDLLVYRRVRGELGGRMRYAISGGSPLESDLNLFFYAAGIMVYEGYGLTET
TAAATIVPPLGPRPGTVGPPVPGTAVRIADDGEVLVKGGIVFGAYRGNPEATEAALTDGW
FATGDLGSLDADGYLTITGRKKDLLVTSGGKNVSPAVLEDRLRSRPPVAQCLVVGDNRPY
VAALITLDPEAVAHWLAVRKLPAGTPLSELVRDEGMRADVQKAVDHANAAVSRAESIRAF
RLIEGEFTEENGLLTPSLKVKRHAAVEAYAAEIEALYATPAR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtacgcagggacctgaaacgggcgagagaccgcggtgacctggcgtcccgtacg
aggaccgagaccgtcacggacgccggcggcaccgtccgcgaggcccgcaccgcccccctc
gcgccccgtcccaccgagggcagcaccgccgacatcccgttcaccaacgcggccgaggcc
cccggcgcggtggtcctgcgccgccaggtggacgacgcctggcggcccgtcaccgcggcg
gagttcgcccgcgaggtgaccgccgtcgccaagggtctcgtcgcggcgggcctcgaaccc
ggcggccgggtcgccgtcatgtcccgcacccgctacgagtggacggtcctggacttcgcc
gtctgggcggccggcggccagaccgtccccgtgtacgccacctcctcggccgaccaggtc
gagtggatcgtccgcgactccggcgcccggcacgtcgtcaccgagaccgccgccaacacc
gccaccgtcctgaccggcaccgccggccacgccgagcacccgcgcgtctgggaactcgac
gccggcgcgctcgccgacctcaccgccctcggcctgggcgtgagcgacgaggaggtcacc
aagcgccgcaccgcgctgaccccggacgcggtcgccaccgtctgctacacctccggcacc
accggacgccccaagggctgcgtcctcacccacgccaacctgcacgccgaggccgccaac
acggtcgaactgctgcacccgatcttcaaggaggtcaccggccagaccgcctcgaccctc
ctcttcctccccctcgcccacatcctgggccgcaccatccagatcgcctgcctgctggcc
cgcatcgagatcggccacttcccgagcatcaagccggacgaactgcgccccgcgctcaag
tcgttccgcccgaccttcctggtcggcgtcccgtacctgttcgagaagatccacgacacc
ggccgggcgaccgccgagaagatcggccgcggcgcctccttcgaacgcgcccaccgcctc
gccgtccgcttcggcgccgcccacctggaacgcttcctgggccgcggcaagggccccacc
ctcggcctgtgggccggctgggccctgtacgacctgctggtctaccgccgggtccggggc
gagctgggcggccggatgcgctacgccatcagcggcggctccccgctggagagcgacctc
aacctgttcttctacgccgccggaatcatggtctacgagggctacggcctgaccgagacc
accgccgccgccaccatcgtcccgccgctcggcccccgccccggcacggtcggcccgccg
gtcccgggcaccgccgtgcgcatcgcggacgacggcgaggtgctggtcaagggcggcatc
gtcttcggcgcctaccggggcaacccggaggccaccgaggcggccctcaccgacggctgg
ttcgccaccggcgacctcggctccctcgacgccgacggctacctcaccatcaccggccgc
aagaaggacctgctggtcacctccggcggcaagaacgtctccccggccgtcctggaggac
cgcctgcgcagccgcccgcccgtcgcccagtgcctggtcgtcggcgacaaccggccctac
gtcgccgcgctgatcaccctcgatccggaggcggtcgcccactggctggcggtgcggaag
ctgcccgccggcaccccgctgtccgagctggtgcgggacgaggggatgcgcgccgacgtc
cagaaggccgtcgaccacgccaacgcggccgtctcccgcgccgagtcgatccgcgccttc
cggctgatcgagggtgagttcaccgaggagaacgggctgctgaccccgtccctgaaggtg
aagcggcacgcggcggtcgaggcgtacgcggccgagatcgaggcgctgtacgcgaccccg
gcacgctga
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