Streptomyces sp. BRB040: ABDE16_24300
Help
Entry
ABDE16_24300 CDS
T11010
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00061
Fatty acid biosynthesis
stbr00071
Fatty acid degradation
stbr01100
Metabolic pathways
stbr01212
Fatty acid metabolism
stbr02024
Quorum sensing
stbr04146
Peroxisome
Module
stbr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABDE16_24300
00071 Fatty acid degradation
ABDE16_24300
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABDE16_24300
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABDE16_24300
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stbr01004
]
ABDE16_24300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stbr04147
]
ABDE16_24300
Enzymes [BR:
stbr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABDE16_24300
Lipid biosynthesis proteins [BR:
stbr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABDE16_24300
Exosome [BR:
stbr04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABDE16_24300
Exosomal proteins of breast cancer cells
ABDE16_24300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
XAR12763
UniProt:
A0AAU6XMJ7
LinkDB
All DBs
Position
5486739..5488616
Genome browser
AA seq
625 aa
AA seq
DB search
MSDTQTLIENRPPSVAGLFLERVAATPDAEAYRYPVPPASGEGPDDWKSLTWAQAAERVY
AIAAGLVELGVQPEQRVALAASTRLEWILTDLGIMCAGAATTTVYPQTNADESAYILSDS
ESRVLIAEDAAQLAKAREKRAELPDLTHVVVIDPAGADTSEDWILTLDDLERRGAARLET
DPQLIKERVGALTKDQLATLIYTSGTTGRPKGVRLPHDNWAYMAKAIAATGLCTKDDVQY
LWLPLAHVFGKVLTSGQIEVGHVTAVDGRVDKIIENLPVVQPTYMAAVPRIFEKVYNGVA
AKARAGGGAKYKIFQWAAEIAREYAKVTQDNFKRTGTASAPAGLRTKHAVADRLVYAKIR
EAFGGRLRACVSGSAALAPEIGYFFAGAGIHILEGYGLTESSAASFVNPGEAYRTGTVGK
PLPGTEVRIAEDGEILLRGPGIMEGYHKLPEKTAEVLESDGWFHTGDIGELSPDGYLRIT
DRKKDLIKTSGGKYIAPAEVEGQFKAVCPYVSNILVHGADRNFCTALIALDEVAITEWAK
ENGLEGKPYAEIVAAPATVEMVDGYVKQLNEGLQRWQTIKKFRLLPRDLDVEHGEITPSL
KLKRPVVEREYKNLIEEMYEGSREA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacacagacactgatcgagaaccgtccgccctccgtggcgggactcttcctg
gagcgggtggccgccacgccggacgccgaggcgtaccgctacccggtgccgccggcctcg
ggcgagggccccgacgactggaagtcgctgacctgggcgcaggccgccgagcgggtctac
gcgatcgcggccggcctggtcgagctgggcgtgcagccggagcagcgggtggcgctggcc
gcctccacccggctggagtggatcctcaccgacctcggcatcatgtgcgccggcgcggcg
acgaccaccgtctacccgcagaccaacgccgacgaatcggcgtacatcctctccgactcc
gagagccgggtgctgatcgcggaggacgccgcgcagctggccaaggcgagggagaagcgg
gccgagctgcccgacctcacccacgtggtcgtgatcgacccggccggcgccgacacctcc
gaggactggattctcaccctcgacgacctggagcgccggggcgcggcccgcctggagacc
gacccgcagctgatcaaggagcgggtcggcgcgctcaccaaggaccagctcgccaccctc
atctacacctccggcaccaccggccggcccaagggcgtccgcctcccgcacgacaactgg
gcgtacatggcgaaggccatcgccgcgaccggcctgtgcaccaaggacgacgtgcagtac
ctgtggctgccgctcgcccacgtcttcggcaaggtgctgacctccggccagatcgaggtc
ggccacgtcacggccgtcgacggccgcgtcgacaagatcatcgagaacctgccggtcgtg
cagccgacctacatggcggcggtgccccgcatcttcgagaaggtctacaacggcgtcgcc
gccaaggcccgtgcgggtggcggggccaagtacaagatcttccagtgggccgcggagatc
gcccgcgagtacgccaaggtcacccaggacaacttcaagcgcaccggcaccgcgagcgcc
cccgccggcctgcgcaccaagcacgccgtcgccgacaggctcgtctacgccaagatccgc
gaggccttcggcggccgcctgcgcgcctgcgtctccggctcggcggccctcgcccccgag
atcggctacttcttcgccggcgcaggcatccacatcctggaggggtacggcctcacggag
tcctccgccgcctccttcgtcaaccccggtgaggcctaccgcaccggcacggtcggcaag
ccgctgcccggcaccgaggtgcgcatcgcggaggacggcgagatcctgctgcgcggcccc
ggcatcatggagggctaccacaagctccccgagaagaccgccgaggtcctcgagtccgac
ggctggttccacaccggcgacatcggcgagctgtcgcccgacggctacctgcgcatcacc
gaccgcaagaaggacctcatcaagacgtccggcggcaagtacatcgcgccggccgaggtc
gagggccagttcaaggcggtctgcccctacgtctccaacatcctggtgcacggcgccgac
cggaacttctgcaccgcgctcatcgccctcgacgaggtcgcgatcacggagtgggccaag
gagaacggtctggagggcaagccgtacgcggagatcgtcgcggcgcccgcgaccgtcgag
atggtcgacggctacgtcaagcagctcaacgagggcctccagcgctggcagaccatcaag
aagttccgcctcctgccccgcgacctcgacgtcgagcacggcgagatcaccccgagcctc
aagctgaagcgcccggtggtggagcgggagtacaagaacctgatcgaggagatgtacgag
ggctcgcgcgaggcgtag
DBGET
integrated database retrieval system