Streptomyces sp. BRB040: ABDE16_26715
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Entry
ABDE16_26715 CDS
T11010
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00470
D-Amino acid metabolism
stbr00550
Peptidoglycan biosynthesis
stbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABDE16_26715 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABDE16_26715 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stbr01011
]
ABDE16_26715 (murD)
Enzymes [BR:
stbr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ABDE16_26715 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
stbr01011
]
Precursor biosynthesis
Amino acid ligase
ABDE16_26715 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox
AlaDh_PNT_C
Pyr_redox_2
His_biosynth
2-Hacid_dh_C
CbiA
Motif
Other DBs
NCBI-ProteinID:
XAR13210
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All DBs
Position
6020456..6021871
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AA seq
471 aa
AA seq
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MPSEFTGKHVTVAGLGVSGVPAAKVLHGLGAHVTVVNDGDDERARTQAAELESLGVTVRL
GDGDTLPEGTELIVTAPGWKPTKPLFTAAGQAGVPVWGDVELAWRLRGLDGRKAAPWLAV
TGTNGKTTTVQMLASILKAAGLRTAAVGNIGVSLLDAVTGDTEYDVLAVELSSYQLHWAP
SLRAHSAAVLNLAPDHLDWHGSMEAYAADKGRIYEGNRVACVYNVADRATEDLVRAADVE
EGCRAVGFTLGTPGPSQLGVVEGLLVDRAFVEDRQKNAQELAEVSDVNPPAPHNIANALA
AAGLACAFGVSAAAVRDGLRAFTPDAHRIAHVADVDGVAYVDDSKATNTHATEASLAAYE
SIVWIAGGLAKGATFDELVTGAAKRLRGAVLIGADRALIREALARHAPEVPVVDLDRTDT
GAMLQAVQEARRLARPGDTVLLAPACASMDMFTNYNQRGDAFAQAVRELGA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcggaattcaccggcaagcacgtcaccgtcgccggactcggcgtctccggcgtc
ccggccgccaaggtcctgcacggcctcggcgcgcacgtgaccgtcgtcaacgacggcgac
gacgagcgcgcccggacgcaggcggcggagctggagtcgctcggtgtcaccgtgcgcctc
ggcgacggggacacgctgcccgaaggcaccgagctgatcgtcaccgcacccggctggaag
cccaccaagcccctgttcacggcggccggacaggccggcgtcccggtctggggcgacgtc
gaactggcctggcggctgcgcggcctggacggccggaaggccgcgccgtggctcgccgtc
accggcaccaacggcaagaccaccaccgtccagatgctcgcctcgatcctgaaggcggcc
ggcctgcgcaccgccgccgtcggcaacatcggcgtctccctcctcgacgccgtcaccggc
gacaccgagtacgacgtcctcgcggtcgagctgtccagctaccagctgcactgggcgccc
tccctgcgcgcccactccgccgccgtgctcaacctcgccccggaccacctcgactggcac
ggctccatggaggcctacgccgccgacaagggccgcatctacgagggcaatcgcgtcgcc
tgcgtctacaacgtcgcggacagggcgaccgaggacctggtccgcgccgccgacgtcgag
gagggctgccgggcggtcggcttcaccctcggcaccccgggaccctcccaactcggcgtc
gtggaaggcctgctggtcgaccgcgccttcgtcgaggaccggcagaagaacgcccaggag
ctggccgaggtctccgacgtcaacccgcccgccccgcacaacatcgccaacgccctcgcc
gccgcgggcctcgcctgcgccttcggcgtctccgccgccgccgtacgggacggactgcgc
gccttcacgccggacgcccaccgcatcgcgcacgtcgccgacgtggacggggtggcgtac
gtggacgactccaaggccaccaacacccacgccaccgaagcctccttggcggcctacgag
tcgatcgtgtggatcgccggcggactggccaagggcgcgaccttcgacgaactggtcacg
ggcgcggcgaagcggctgcgcggtgccgtcctcatcggcgccgaccgcgccctgatccgc
gaagccctggcgcgacacgcccccgaagtacccgtggtcgacctcgaccggaccgacact
ggtgcgatgctccaggccgtccaggaggcgcggcggctcgcccggcccggtgacacggtg
ctgctggccccggcctgtgcctccatggacatgttcaccaactacaaccagcgcggtgac
gcgttcgcgcaggccgttcgcgaactcggcgcctga
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