Streptomyces sp. BRB040: ABDE16_27140
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Entry
ABDE16_27140 CDS
T11010
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr03030
DNA replication
stbr03410
Base excision repair
stbr03420
Nucleotide excision repair
stbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABDE16_27140 (polA)
03410 Base excision repair
ABDE16_27140 (polA)
03420 Nucleotide excision repair
ABDE16_27140 (polA)
03440 Homologous recombination
ABDE16_27140 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stbr03032
]
ABDE16_27140 (polA)
03400 DNA repair and recombination proteins [BR:
stbr03400
]
ABDE16_27140 (polA)
Enzymes [BR:
stbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABDE16_27140 (polA)
DNA replication proteins [BR:
stbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABDE16_27140 (polA)
DNA repair and recombination proteins [BR:
stbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABDE16_27140 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABDE16_27140 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XAR13292
LinkDB
All DBs
Position
6116821..6119544
Genome browser
AA seq
907 aa
AA seq
DB search
MAKTASKKTDSTSGGRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLAN
TLRDEAPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDSMHVPRFA
VEGFEADDVIATLATQAEAEGFDVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPEK
VFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERVDEVKGK
AGQNLRDHLESVKLNRRLTELERRVELPKTVTDLERTAYDRKGVAVILDTLEIRNPSLRE
RLHAVDPGAEEAEAAPVVADGVELDGTVLGTGELAGWLTEHGDRPLGVATVDTWALGTGS
VTEVALAAADGKAAWFDPTETDEADETAFRTWLADPDRPKVLHNAKGAMRVFAEHGWSVA
GVDMDTALAAYLVKPGRRSFDLDALSLEYLHRELAPAAAADGQLAFGADEGAEAEALMVQ
ARAILDLGEAFEGRLADVGAADLLRDMELPTSALLARMERHGIAADREHLQAMEQMFAGA
VQQAVKEAHAAAGREFNLGSPKQLQEVLFGELNLPKTKKTKTGYTTDADALAWLAAQTDN
ELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVRT
DEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLTEAFTSGEDLHTTAAAQVF
SVEQSAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARGLMDAYFERFGGVRDYL
RRVVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAMLN
VDKALREAGLESRMLLQVHDEIVLEIAPGERATAEELVRREMADAVRLRVPLGVSVGAGR
DWESAAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagacagcatcgaagaagaccgacagcacctccggcggccgaccgcggctgatg
ctcatggacgggcactccctggcgtaccgcgcgttcttcgcgctgcccgcggagaacttc
acgaccgcgacgggccagccgaccaacgcgatctacggcttcgcgtcgatgctggccaac
accctgcgtgacgaggcgcccacgcacttcgcggtggcgttcgacgtctcccgcaagacc
tggcggtccgaggagttcaccgagtacaaggcgaaccgctccaagaccccggacgagttc
aagggtcaggtcgagctgatcggtgagctgctcgactccatgcacgtcccccgcttcgcc
gtcgagggcttcgaggcggacgacgtcatcgccaccctcgccacccaggccgaggccgag
ggcttcgacgtgctgatcgtcaccggcgaccgggactccttccagctggtcagcgagcac
accacggtcctctaccccaccaagggcgtctccgagctgacccgcttcaccccggagaag
gtcttcgagaagtacgggctgacccccgcccagtaccccgacttcgcggcgctgcgcggc
gacccgtccgacaacctgcccggcatcccgggcgtcggcgagaagaccgccgcgaagtgg
atcaaccagttcgggtccttcgccgagttggtcgagcgcgtcgacgaggtcaagggcaag
gccgggcagaacctgcgcgaccacctggagtccgtcaagctcaaccgccggctcaccgag
ctggagcggcgcgtcgagctgccgaagacggtcaccgacctggagcggacggcgtacgac
cgcaagggcgtcgcggtgatcctggacaccctggagatccgcaacccctccctgcgcgag
cgcctccacgccgtggacccgggcgccgaggaggccgaggccgccccggtggtcgcggac
ggtgtggagctggacggcacggtcctcggcacgggcgagctggccggctggctcaccgag
cacggcgaccggccgctcggcgtggccacggtcgacacctgggccctgggcaccggctcg
gtcaccgaggtcgcgctggcggcggccgacggcaaggccgcctggttcgacccgacggag
accgacgaggccgacgagacggcgttccggacctggctcgccgacccggaccggccgaag
gtcctgcacaacgccaagggcgcgatgcgcgtcttcgccgagcacggctggagcgtcgcc
ggcgtggacatggacaccgcgctcgccgcctacctggtcaagcccggccgccgttccttc
gacctggacgcgctgtccctggagtacctgcaccgcgagctggcccccgccgccgcggcc
gacgggcagctcgccttcggcgcggacgagggcgccgaggccgaggcgctgatggtgcag
gcccgcgcgatcctcgacctgggcgaggccttcgagggccgcctggcggacgtcggcgcc
gccgacctgctgcgcgacatggagctgcccacgtccgcgctgctcgcccgcatggagcgg
cacggcatcgccgccgaccgggaacacctccaggcgatggagcagatgttcgcgggcgcc
gtccagcaggcggtgaaggaggcacacgcggcggccggacgggaattcaacctgggctcg
cccaagcagctccaggaagtcctcttcggcgagctgaacctgccgaagaccaagaagacc
aagaccggctacaccaccgacgccgacgccctggcctggctcgccgcccagacggacaac
gaactgccggtgatcatgctccgccaccgcgagcaggccaagctgcgcgtcacggtggag
ggcctgatcaagacgatcgccgcggacggccgtatccacaccacgttcaaccagacggtc
gccgcgaccggccgcctctcgtccacggacccgaacctgcagaacatcccggtccgcacc
gacgagggccgcgccatccgccgcggcttcgtggtgggcgagggcttcgagtccctgatg
acggccgactacagccagatcgagctgcgcgtgatggcccacctgtccgaggacgagggc
ctgaccgaggcgttcacgtccggagaggacctccacaccaccgcggcggcccaggtcttc
tccgtcgagcagtcggccgtggacgcggagatgcgccgcaagatcaaggccatgtcctac
ggcctggcgtacggcctgtccgccttcggtctctcccagcagctgaacatcgaggcggcc
gaggcccgcggcctcatggacgcctacttcgagcgcttcggcggtgtccgggactatctg
cgccgggtcgtcgacgaggcacgggccacgggctacacggcgaccctcttcggccgccgc
cgttacctgcccgacctcaacagcgacaaccgccagcgccgcgaggcggccgagcgcatg
gcactgaacgcgccgatccagggcacggcggccgacatcgtcaagatcgccatgctcaac
gtggacaaggcgctgcgcgaggccggcctcgagtcccgcatgctcctccaggtccacgac
gaaatcgtcctggagatcgccccgggcgagcgcgcgacggcagaggaactggtccgccgc
gaaatggccgacgcggtacggctcagggtccccctgggcgtctcggtgggcgccggccga
gactgggagtcagcagcgcactag
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