Streptomyces sp. BRB040: ABDE16_28455
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Entry
ABDE16_28455 CDS
T11010
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
stbr Streptomyces sp. BRB040
Brite
Enzymes [BR:
stbr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
ABDE16_28455
Ribosome biogenesis [BR:
stbr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ABDE16_28455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
XAR13545
UniProt:
A0AAU6XPA0
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All DBs
Position
6396480..6397595
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AA seq
371 aa
AA seq
DB search
MRSSSGRNSSGNNGGSRGGNSGGRGGSGGGRGNHRGAGNNRDDKQGGRPKKPRPEERRYD
VGPGATQDGPKSGRGPSARGGAKGGPKRPQQRGRSAPATSREYETRAEERNRERYAGKKD
VKLPKTFPGAEQEGERLQKVLARAGYGSRRACEELIEQARVEINGEIVLEQGRRVDPEKD
EVKVDGLTVATQSYQFFSLNKPAGVVSTMEDPEGRQCLGDYVTNRETRLFHVGRLDTETE
GVILLTNHGELAHRLTHPRYGVKKTYLAHIVGPIPRDLGKRLKDGIQLEDGYARADHFRV
VEQTGKNYLVEVTLHEGRKHIVRRMLAEAGFPVDKLVRTAFGPITLGDQKSGWLRRLSNT
EVGMLMQEVDL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcagcagcggcaggaacagcagcggaaacaacggcgggagccgtggtggcaac
agcggcggccgcggcgggagtggcggtggccgcggcaaccaccgcggcgccggcaacaac
cgcgacgacaagcagggcggccgtcccaagaagccgcgcccggaggagcggcgctacgac
gtgggtcccggcgccacccaggacggccccaagtcgggccgcggaccctcggcccgcggc
ggcgccaagggcggcccgaagcggccccagcagcgcgggcgcagcgccccggccacgtcc
cgcgagtacgagacccgggccgaggagcgcaaccgcgagcggtacgcagggaagaaggac
gtcaagctgcccaagaccttccccggcgccgagcaggagggcgagcggcttcagaaggtc
ctcgcgcgcgcgggctacggctcccggcgcgcctgcgaggagctgatcgagcaggccagg
gtcgagatcaacggcgagatcgtcctcgagcaaggacgccgtgtcgacccggagaaggac
gaggtcaaggtcgacggcctgaccgtcgccacgcagtcgtaccagttcttctcgctgaac
aagcccgccggtgtcgtctccaccatggaggaccccgagggccgccagtgcctcggcgac
tacgtcaccaaccgcgagacccgcctcttccacgtcggccggctcgacaccgagaccgag
ggcgtcatcctgctcaccaaccacggtgagctggcccaccgcctgacccacccccggtac
ggcgtgaagaagacctacctcgcgcacatcgtgggcccgatcccgcgcgacctcggcaag
cgcctcaaggacggcatccagctggaggacgggtacgcgcgcgcggaccacttccgggtc
gtcgagcagaccggcaagaactacctggtcgaggtcaccctgcacgagggccgcaagcac
atcgtccgccggatgctggcggaggcgggcttccccgtcgacaagctggtgcgcaccgcc
ttcggcccgatcaccctgggcgaccagaagtcgggctggctgcgccgcctgtccaacacg
gaggtcgggatgctgatgcaggaggtcgacctctag
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