Streptomyces sp. BRB040: ABDE16_30180
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Entry
ABDE16_30180 CDS
T11010
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00750
Vitamin B6 metabolism
stbr01100
Metabolic pathways
stbr01240
Biosynthesis of cofactors
Module
stbr_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
ABDE16_30180 (pdxS)
Enzymes [BR:
stbr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
ABDE16_30180 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
IGPS
TetR_C_27
His_biosynth
NanE
Motif
Other DBs
NCBI-ProteinID:
XAR13858
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Position
6775882..6776793
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AA seq
303 aa
AA seq
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MSSTLPENQAPETGTARVKRGMAEQLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPAD
IRKDGGVARMSDPDMIEGIIGAVSIPVMAKSRIGHFVEAQVLQSLGVDYIDESEVLTPAD
EVNHSDKFAFTTPFVCGATNLGEALRRIAEGAAMIRSKGEAGTGNVVEAVRHLRQIKNEI
ARLRGYDNNELYAAAKELRAPYELVKEVSQLGKLPVVLFSAGGVATPADAALMRQLGAEG
VFVGSGIFKSGDPAKRAAAIVKATTFYDDPKIIADASRNLGEAMVGINCDTLPETERYAN
RGW
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagcacgctccccgaaaaccaggcacccgagaccggcaccgcccgcgtgaagcgc
ggcatggccgagcagctcaagggcggtgtcatcatggacgtcgtcacgccggagcaggcg
aagatcgccgaggacgcgggcgccgtggccgtcatggcactggagcgcgtccccgccgac
atccgcaaggacggcggcgtggcccggatgtccgacccggacatgatcgagggcatcatc
ggcgccgtctccatccccgtgatggccaagtcccgcatcggccacttcgtcgaggcccag
gtcctccagtccctcggcgtcgactacatcgacgagtccgaggtcctcaccccggccgac
gaggtcaaccacagcgacaagttcgccttcaccacccccttcgtctgcggcgcgaccaac
ctgggcgaggccctgcgccggatcgccgagggcgccgcgatgatccgctccaagggcgag
gccggcaccggcaacgtcgtcgaggccgtccgccacctgcgccagatcaagaacgagatc
gcccgcctgcgcggctacgacaacaacgagctctacgccgccgccaaggagctgcgcgcc
ccctacgagctggtcaaggaggtctcccagctgggcaagctgccggtcgtcctcttctcg
gccggcggcgtggccaccccggccgacgccgccctgatgcgccagctcggcgccgagggc
gtcttcgtcggctccggcatcttcaagtccggcgacccggccaagcgcgccgccgccatc
gtgaaggcgaccaccttctacgacgacccgaagatcatcgcggacgcgtcccgcaatctc
ggcgaggccatggtcggcatcaactgcgacaccctccccgagaccgagcgctacgccaac
cgcggctggtaa
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