Streptomyces sp. BRB040: ABDE16_30370
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Entry
ABDE16_30370 CDS
T11010
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
stbr Streptomyces sp. BRB040
Pathway
stbr00220
Arginine biosynthesis
stbr00240
Pyrimidine metabolism
stbr00250
Alanine, aspartate and glutamate metabolism
stbr01100
Metabolic pathways
stbr01110
Biosynthesis of secondary metabolites
stbr01240
Biosynthesis of cofactors
Module
stbr_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
ABDE16_30370 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ABDE16_30370 (carB)
00220 Arginine biosynthesis
ABDE16_30370 (carB)
Enzymes [BR:
stbr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
ABDE16_30370 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
ATP-grasp_4
ATP-grasp_3
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
XAR13895
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Position
6816506..6819814
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AA seq
1102 aa
AA seq
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MPKRTDIQSVLVIGSGPIVIGQAAEFDYSGTQACRVLKAEGLRVVLVNSNPATIMTDPEI
ADATYVEPITPEFVEKIIAKERPDALLPTLGGQTALNTAISLHGNGVLEKYGVELIGANV
EAINKGEDRDLFKEVVEEVRKKTGHGESARSYICHSMDDVLKGVDALGGYPVVVRPSFTM
GGAGSGFAHDEEELRRIAGQGLTLSPTTEVLLEESILGWKEYELELMRDKNDNVVVVCSI
ENFDPMGVHTGDSITVAPAMTLTDREYQVLRDVGIAIIREVGVDTGGCNIQFAVNPEDGR
VIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITQETPASFEPTLDYV
VVKAPRFAFEKFPSADSTLTTTMKSVGEAMAIGRNFTEAFQKALRSLEKKGSQFTFVGEP
GDKLELLREAVRPTDGRINAVMQAIRAGATPEEVFEHTKIDPWFVDQLFLIKEVADEIAG
ARELTADLLTEAKRHGFSDQQIAEISGLGEDVVRQVRHALGVRPVYKTVDTCAAEFAART
PYFYSSYDEETEVASREKPAVIILGSGPNRIGQGIEFDYSCVHASFALSDAGYETVMVNC
NPETVSTDYDTSDRLYFEPLTLEDVLEIVHAEQQAGPVAGVIVQLGGQTPLGLSQALKDN
GVPIVGTSPEAIHAAEDRGAFGRVLAEAGLPAPKHGTATTFAEAKAIADEIGYPVLVRPS
YVLGGRGMEIVYDETRLEAYIAESTEISPSRPVLVDRFLDDAIEIDVDALYDGEELYLGG
VMEHIEEAGIHSGDSACALPPITLGGFDIKRLRTSTEGIAKGVGVRGLINIQFAMAGDIL
YVLEANPRASRTVPFTSKATAVPLAKAAARISLGATIAELRAEGLLPASGDGGTLPLDAP
ISVKEAVMPWSRFRDIHGRGVDTVLGPEMRSTGEVMGIDSVFGTAYAKSQAGAYGPLPTK
GRAFISVANRDKRSMIFPARELVAHGFELMATSGTAEVLKRNGINATVVRKQSEGTGPNG
EKTIVQLIHDGEVDLIVNTPYGTGGRLDGYDIRTAAVARSVPCLTTVQALAAAVQGIDAL
NHGDVGVRSLQEHAEFLIAARD
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaagcgcaccgatatccagtccgtcctggtcatcggctccggcccgatcgtcatc
ggccaggccgccgagttcgactactccggcacccaggcgtgccgcgtgctcaaggccgag
ggcctgcgcgtcgtcctggtgaactccaacccggcgacgatcatgaccgacccggagatc
gccgacgccacctacgtcgagccgatcacgcccgagttcgtcgagaagatcatcgccaag
gagcgccccgacgccctcctgcccaccctcggcgggcagacggccctcaacaccgccatc
tccctgcacggcaacggcgtcctggagaagtacggcgtcgaactgatcggcgccaacgtc
gaggccatcaacaagggcgaggaccgcgacctgttcaaggaggtcgtcgaggaggtccgc
aagaagaccggccacggcgagtccgcccggtcgtacatctgccactccatggacgacgtc
ctcaagggcgtcgacgcgctcggcggctaccccgtcgtcgtccgcccctccttcaccatg
ggcggcgccggctccggcttcgcccacgacgaggaggagctgcgccgcatcgccggtcag
ggcctcaccctctcgccgaccaccgaggtgctcctggaggagtccatcctcggctggaag
gagtacgagctggagctgatgcgcgacaagaacgacaacgtcgtggtcgtctgctccatc
gagaacttcgaccccatgggcgtgcacaccggcgactcgatcaccgtggcgcccgcgatg
acgctcaccgaccgcgagtaccaggtgctgcgcgacgtcggtatcgcgatcatccgcgag
gtcggcgtcgacaccggcggctgcaacatccagttcgcggtgaaccccgaggacggtcgc
gtgatcgtcatcgagatgaacccgcgcgtgtcgcgctcctcggccctggcctccaaggcg
accggcttccccatcgccaagatcgccgcgaagctcgccgtcggctacacgctggacgag
atcccgaacgacatcacgcaggagaccccggcctccttcgagcccacgctggactacgtg
gtcgtcaaggcaccgcgcttcgccttcgagaagttcccgagcgccgactccaccctcacc
acgaccatgaagtcggtcggcgaggccatggccatcggccgcaacttcaccgaggccttc
cagaaggcgctgcgctcgctggagaagaagggcagccagttcaccttcgtcggcgagccc
ggcgacaagctggagctgctgcgggaggccgtgcggcccaccgacgggcgcatcaacgcc
gtcatgcaggccatccgcgcgggcgccacgcccgaggaggtcttcgagcacaccaagatc
gacccgtggttcgtcgaccagctcttcctcatcaaggaggtcgccgacgagatcgccggg
gcccgcgagctgaccgccgacctgctcaccgaggccaagcggcacggcttctccgaccag
cagatcgccgagatcagcggcctgggcgaggacgtggtccgccaggtgcggcacgcgctc
ggcgtccgcccggtctacaagaccgtcgacacctgcgccgccgagttcgccgcccggacg
ccgtacttctactcctcctacgacgaggagaccgaggtcgcgtcccgcgagaagcccgcg
gtgatcatcctgggctccgggcccaaccggatcggccagggcatcgagttcgactactcc
tgcgtccacgcctccttcgcgctgtccgacgccgggtacgagaccgtgatggtcaactgc
aacccggagaccgtctccaccgactacgacacctccgaccggctctacttcgagccgctc
accctggaggacgtcctggagatcgtccacgccgagcagcaggccggtcccgtcgcgggc
gtgatcgtccagctcggcggtcagaccccgctgggcctgtcccaggcgctcaaggacaac
ggcgtgccgatcgtcggcacctccccggaggccatccacgccgccgaggaccgcggcgcc
ttcgggcgggtcctcgccgaggccgggctcccggcccccaagcacggcaccgccaccacc
ttcgccgaggccaaggccatcgccgacgagatcggctacccggtcctggtgcggccctcc
tacgtcctcggcggacgcggcatggagatcgtctacgacgagacccggctggaggcgtac
atcgccgagtcgaccgagatcagcccgtcccggccggtcctggtcgaccgcttcctggac
gacgccatcgagatcgacgtcgacgccctgtacgacggcgaggagctgtacctcggcggc
gtcatggagcacatcgaggaggccggcatccactccggcgactcggcgtgcgccctgccc
cccatcacgctcggcggcttcgacatcaagcggctgcgcacctccaccgagggcatcgcc
aagggcgtcggcgtgcgcggcctgatcaacatccagttcgcgatggccggggacatcctc
tacgtcctggaggccaacccccgcgcctcccgcaccgtccccttcacctcgaaggcgacg
gcggtgccgctggccaaggccgccgcccgcatctcgctgggcgcgaccatcgccgagctg
cgcgccgagggcctgctcccggcgagcggcgacggcggcaccctgccgctggacgcgccg
atctccgtcaaggaggccgtgatgccctggtcccgcttcagggacatccacggccgcggc
gtcgacacggtcctcggcccggagatgcgctccaccggcgaggtcatgggcatcgactcg
gtcttcggcacggcgtacgccaagtcgcaggccggcgcgtacgggccgctgccgacgaag
ggccgcgccttcatctcggtcgccaaccgcgacaagcgttcgatgatcttcccggcccgc
gagctggtcgcccacggcttcgagctgatggccacctccggcaccgccgaggtcctcaag
cgcaacggcatcaacgccaccgtcgtgcgcaagcagtccgagggcaccggcccgaacggc
gagaagaccatcgtccagctcatccacgacggcgaggtcgacctcatcgtcaacacgccg
tacggcaccggcggccgcctcgacggctacgacatccgcacggcggccgtggcccgctcc
gtgccctgcctgaccacggtccaggcgctggcggcggcggtccagggcatcgacgccctc
aaccacggcgacgtgggagtgcgctcactccaggaacacgccgagttcctgatcgccgcc
cgcgactag
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