Streptomyces sp. BRB040: ABDE16_35305
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Entry
ABDE16_35305 CDS
T11010
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
stbr Streptomyces sp. BRB040
Brite
KEGG Orthology (KO) [BR:
stbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stbr03021
]
ABDE16_35305
Transcription machinery [BR:
stbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABDE16_35305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
DUF7343
HTH_3
MarR
HTH_31
HTH_37
HTH_Crp_2
MarR_2
Sigma70_ECF
GerE
HTH_24
Motif
Other DBs
NCBI-ProteinID:
XAR15488
LinkDB
All DBs
Position
complement(7882936..7883727)
Genome browser
AA seq
263 aa
AA seq
DB search
MRVAGRTQPHPHDDAPDTAAAFDRLAGLTEGPERKALRDELIRVWLPMAERIAVRFRGRG
ENLEDLYQVAALGLVKAVDHYDPERGHAFEAYAVPTVTGEIKRHFRDHMWTLHVPRRIQD
LRNRVRRSAKELAQTTPGRAPTVEEIAEHAQLTTVEVRTGMEALECFSALSLEAEMPGTD
GYALGDALGGPDPAFDAVVDRVAVRPCLEALPERERTILYLRFFGGMTQSGIAEQLGISQ
MHVSRLLTGCFDRIREEILAEAR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcgccggcagaacccagccccacccgcacgacgacgcccccgacacggccgcg
gcgttcgaccggctcgccgggctgaccgagggaccggagcgcaaggcgctgcgggacgaa
ctgatccgggtctggctgcccatggcggagcggatcgccgtccgcttccggggccgcggc
gagaacctggaggacctctatcaggtggcggccctgggcctggtcaaggccgtcgaccac
tacgacccggagcgcggccacgccttcgaggcgtacgcggtgccgaccgtgaccggggag
atcaaacggcacttccgcgaccacatgtggacgctgcacgtgccgcggcgcatccaggac
ctgcgcaaccgggtccgcagatcggcgaaggagctggcgcagaccacgccggggcgcgcg
ccgaccgtcgaggagatcgccgagcacgcgcaactgaccacggtcgaggtgcggaccggc
atggaggccctggagtgcttctccgcgctgtcactggaggcggagatgcccggcaccgac
gggtacgcgctcggtgacgcgctgggcgggcccgatcccgccttcgacgcggtcgtggac
cgggtggcggtgcggccctgcctggaggcgcttcccgagcgcgagcgcaccatcctctac
ctgcgcttcttcggagggatgacgcagagcggcatcgccgagcagctcggcatctcccag
atgcacgtctcccggctgctcaccggctgcttcgaccggatacgcgaggagatcctggcg
gaggcgcgctga
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