Streptococcus thermophilus CNRZ1066: str0062
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Entry
str0062 CDS
T00212
Symbol
polC
Name
(GenBank) DNA polymerase III alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
stc
Streptococcus thermophilus CNRZ1066
Pathway
stc03030
DNA replication
stc03430
Mismatch repair
stc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
str0062 (polC)
03430 Mismatch repair
str0062 (polC)
03440 Homologous recombination
str0062 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stc03032
]
str0062 (polC)
03400 DNA repair and recombination proteins [BR:
stc03400
]
str0062 (polC)
Enzymes [BR:
stc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
str0062 (polC)
DNA replication proteins [BR:
stc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
str0062 (polC)
DNA repair and recombination proteins [BR:
stc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
str0062 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
B
YhfH
Motif
Other DBs
NCBI-ProteinID:
AAV61679
UniProt:
Q5M1Y0
LinkDB
All DBs
Position
71574..75968
Genome browser
AA seq
1464 aa
AA seq
DB search
MSDKFKLLLKQIHFPQHEEAYNEIKSGSIESVKLFKSKRQWFFVFSFRNLLSYETFTLFD
NLLHSSFDSLGAKVSYMINVEDISCDQSLLEAYFSYALDILKSSHFSIYSLFSNLGIEIS
NNSISVKAPAHILRENLHERFIALIADVLSNVGLSNVSISVLEDKEASSSLEEAYETNKI
SLQEEAESQARQALQSIVQSSPVPPPQKHQAQNFAEKQSQRVASFDKAEITPMIEVNSEE
NRIVFEGYIFDVEQRETKTGRIIINFKVTDYTSSFAMQRWVKDSEELVKFGMIKKGNWVR
VRGRIENNPFTHSLTMNVQDIKEISHTPRKDLMPEGQKRVEFHAHTNMSTMDAIPTVEEL
IDTAAFWGHPAVAITDHANVQSFPHGYHKAKKAGIKAIFGLEANLVEDKVPIVYNSENLE
LKEATYVVFDVETTGLSAVHNDLIQIAASKMHKGNIVEQFDEFIDPGYPLSAFTTELTGI
TDNHVKGAKPLVQVLQEFQEFCKGAVLVAHNATFDVGFMNANYERHQLPTISQPVIDTLE
FARNLYPEYKRHGLGPLTKRFGVALDHHHMANYDAEATGRLLFIFIKDVFEKHGLTNLEQ
LNTELVSDDSYKKSRVKHATLYVQNQTGLKNIFKLVSLSNVSYFEGVARIPRKVLDEYRE
GIIVGSACADGEVFDTLLSHGIDKAVEVAKYYDFIEVMPPAIYAPLIAKDLIKDEGAIEQ
LIRDLIEVANRLDKPVLATGNVHYINPEDAIYREIIVRALGQGAMINRPIGKEENAQPAP
LPEAHFRTTNEMLDEFAFLGKDLAYEIVVANTQAMANQIEEVEVVKKDLYTPYIDRAEEQ
VAEMTYAKAFELYGNPLPDIIDLRIEKELSSILGNGFAVIYLASQMLVNRSNERGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYLCPKCQHSEFITDGSYGSGFDLPDKECSECGTEYK
KDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT
AYGFVKGYERDYNKFYRDAEVDRLAMGVAGVKRNTGQHPGGIVVIPNYMDVYDFTPVQYP
ADDVTAAWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIRADDPDVMKL
FSGTEVLGVTPEQIGTSTGVLGIPEFGTNFVRGMVEETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLDPKMAFTIMERVRKGMWLKISEEERNG
YIQAMRENNVPDWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPIYYYCAYFSIRA
KAFELKTMSAGLDAVKARMEDIKEKRQRNEATNLENDLFTTLEIVNEMLERGFTFGQLDL
YKSQATEFLIEGDTLIPPFIALEGLGENVAKQLVAAREEGEFLSKTELRKRGGLSSTLVE
RLDEMGILGNMPEDNQLSLFDDFF
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaatttaagcttcttttaaaacaaattcattttccacagcatgaggaagct
tataatgaaattaaaagtggttctattgaatcagtaaagctatttaaatcaaaacgtcag
tggttttttgttttttctttcagaaatctactgtcatatgagactttcactctttttgat
aatctgcttcattcttcttttgattctttaggggctaaagtttcatatatgattaatgta
gaagatatttcttgtgatcaatctttacttgaagcttatttttcatatgctttagatatt
ttaaaatcatcacacttttcaatctattccctattctccaatttggggattgagatttct
aataatagtatttctgttaaggctcctgcgcatatccttagagagaatttacatgagaga
tttatagccctgattgctgatgttctttcgaatgttggtttatctaatgtttctatttcg
gttcttgaggataaagaagcttcatcctctcttgaagaggcttacgagacaaataagatc
tccttacaagaagaggcagaatctcaagctagacaagcacttcaatcaattgttcaaagt
tcgccggtaccaccacctcagaagcatcaggcccaaaattttgctgagaaacaaagtcaa
cgagttgcaagctttgataaggctgagattactccaatgattgaagtcaattctgaagaa
aataggattgtttttgaaggatatatttttgatgtggagcaacgtgaaacgaaaacaggt
aggattataataaattttaaggtaactgattatacctctagttttgctatgcaacgttgg
gtgaaggatagcgaagaacttgttaagttcggtatgattaaaaaaggaaactgggtaaga
gttcgaggtcgtattgagaataatccttttacacatagtttgactatgaacgtacaagat
attaaggaaatttctcatactcctcgtaaggatttgatgcccgagggacagaagcgagtt
gaatttcatgctcatactaacatgtcaactatggatgctataccaacagttgaagagctc
atcgatacagcggctttttggggacatccagcagttgcgataacagatcatgcaaatgtt
caaagttttcctcatggctaccataaagctaagaaagctggaattaaggcgatttttggt
cttgaagccaatcttgttgaggacaaagttcctattgtttataattccgaaaatttggaa
ttaaaagaagcaacttatgttgtattcgacgtagaaacaacaggtttgtctgctgttcat
aatgatttgatccagattgcggcatcaaaaatgcataaaggtaatattgttgagcaattt
gatgaattcattgatccaggatatccgctttctgcgtttacgactgaattgactggtatt
actgataatcatgttaaaggtgccaaacctttagtgcaagttttacaggagtttcaagaa
ttctgtaaaggagctgtgctagtcgcccacaatgcgacctttgacgttgggtttatgaat
gccaattatgaaagacatcagttaccgacaatctcacaaccggttattgatactttagaa
tttgcacggaatctttatcctgagtataaacgtcatggtttgggtcctttgacaaagcgt
tttggcgttgccttggaccaccaccacatggccaactatgatgcggaagcaacaggtcgt
ttgttgtttattttcattaaagatgtattcgaaaagcatggattgactaatctggaacag
ttgaacacagaattggtctctgatgattcgtataagaagtctcgtgtcaaacatgcgacg
ctatatgttcagaatcaaacgggtttgaagaatatctttaaattggtaagcctatcaaat
gtatcatattttgagggagtagcccgtattcctcgtaaggttttagatgagtatcgtgag
ggaatcatagtcggttccgcatgtgcagatggtgaagtttttgatactctcttgtctcat
ggtattgataaggcagttgaagttgctaaatactatgattttattgaagttatgccacca
gcgatttatgcgccattgattgcaaaggatttaatcaaggatgagggagctatagaacaa
cttattagggatttgattgaagttgctaatcgtcttgacaagcctgtgcttgctacggga
aatgtacattatatcaatcctgaagatgccatttatcgtgaaatcattgttcgtgctttg
ggacaaggagctatgatcaatagaccaattggtaaggaggaaaacgctcaacctgctcct
ctaccggaagctcattttagaacaaccaatgagatgctagatgaatttgcctttttgggg
aaagacttagcctatgagattgttgtagctaatacacaagctatggcaaatcaaatcgaa
gaggttgaagtcgtcaaaaaagacttgtatacaccttatattgatcgtgcagaagaacag
gttgcagagatgacttatgctaaagcatttgagctttatggtaatcctttgcctgatatt
attgacttgcggattgagaaagagttgtcctcaattcttggtaatggatttgccgtaata
tatctggcatcgcagatgctggtgaaccgttcaaatgaacgtggctacctggttggctct
cgggggtctgttggctctagttttgttgcaacaatgattggaattactgaggtaaatcct
atgccacctcattatttatgtcctaaatgccaacactcagagtttatcacggatggttct
tatggctctggctttgatttgcctgataaggagtgttcagaatgtggaactgagtataaa
aaagatggtcaggatattcctttcgagaccttcctcggttttgatggggataaggttcct
gatattgatttgaacttctcaggagatgatcagccgtcggctcacttggatgtacgtgat
atttttggagagcaatatgccttccgtgctggaacggtaggtactgttgcagatcggaca
gcttatggttttgtcaagggttacgaacgtgattacaataagttctatcgtgatgctgag
gttgatcgtttggctatgggtgttgctggggttaagcgaaatacaggtcagcacccaggt
ggtatcgttgttattccaaattatatggatgtctatgattttacacctgttcaatatccg
gctgatgatgtaactgctgcttggcagacaactcactttaacttccacgatatcgatgag
aacgtgttgaagctagatattctgggacatgatgatccgactatgattcgtaagttacag
gacctatcaggaattgatccaaaggatattcgagcagatgatccggatgtgatgaaactt
ttttcagggactgaggttttaggggtaacgcctgaacaaattgggacctcaacgggcgtg
ttgggaatccctgagtttgggactaactttgttcgtggtatggtcgaagagacgcatccg
acgacctttgcggaactcttacagttatctggtttatcccatggtacagatgtttggttg
ggtaatgcacaagatttgattaaggaaggtattgccaccctgaaaacagttatcggttgt
cgtgacgatatcatggtatacctaatgcatgcagggttagatcctaagatggcctttacc
attatggaacgtgtgcgtaagggaatgtggttgaaaatttctgaagaagagcgaaatggt
tatattcaagccatgcgtgaaaataatgttccggactggtatattgaatcttgtggtaaa
atcaagtacatgttccctaaagcccatgcggctgcctacgttatgatggcccttcgcgta
gcttatttcaaggtgcaccatcctatttattactattgtgcttacttctcgattcgagcc
aaagcatttgagcttaagacgatgtctgcagggctcgatgctgttaaagctcgaatggaa
gatattaaggagaagcgccaacgaaatgaagctactaatcttgaaaatgacttgtttaca
acgcttgaaattgtcaatgaaatgttagaacgtggctttacttttggtcagttagatctt
tataagagtcaggcgactgaatttttgattgaaggagataccttgattcctccgtttatc
gcacttgaaggtttgggtgaaaacgttgcgaagcaattggttgctgcgcgtgaagaaggg
gaattcctctccaaaacagaattgcgtaaacgaggaggcctatcatcaaccttggttgaa
agattagatgaaatgggcattctaggaaatatgccagaagataatcagttaagtcttttt
gatgatttcttttaa
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integrated database retrieval system
