Streptococcus thermophilus CNRZ1066: str1394
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Entry
str1394 CDS
T00212
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
stc
Streptococcus thermophilus CNRZ1066
Brite
KEGG Orthology (KO) [BR:
stc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stc03400
]
str1394 (sbcC)
DNA repair and recombination proteins [BR:
stc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
str1394 (sbcC)
Archaeal homologous recombinant proteins
str1394 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
SpoIVA_middle
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AAV62931
LinkDB
All DBs
Position
complement(1230216..1233395)
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN
VEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIDRVLQQERAKQGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEERLRQSNKDMDKRQAQLDSHFASQVWSEEELAVLASTPASEKLARL
EEFLSQRQESLTEQKSILKAAHEDLAQLQKSLQTAQDLAKIFQELEQAKERYRLEIEEGA
QGQAEAKVHLEELQFAQGLQETIRTLKQYRKQLMQLEQDLEIAQEALSEKQQAFEDVKAK
KEELTVQSKDFLQKEEELETWKENIIYAQSLAQEQEKIKRSTTNYKQLEETYQQARKEVE
MLNKSLSDLEANRLSLDSLHEAEKLFQIVGYSVENQLAQDLKEIENLNQELTKTEKRHQT
LSFDIDQAQEILKELEEELRRTLVSRRQLMIVQLQAELEEGHPCMVCGALEHPNVGGAQA
DEVALKNLMDQVEKLQAQKEKQVATLSNRQATLSEVASKRQDLLDQVAKVKATLEKHYQE
LEEHVKGRFDFDFSIDYETDRGQALLLKVEQYYQELQKRYDKEETDYIRYQDELGKAQKK
ATDLAKTYQEAKAVLDQAQERLEDLQEAHPELESVEVYQERISLAHQELNLYNKQVKENS
EAYNQLHADIKGIKGQIESITKSKDKVNQDVKRLSAELEQSLKAEGALANDLEQVELWLI
EVNNQAIPMLQAKLTTYATLKQELQAQIRKGQELLQNQEQPDLDSLAQAVQNCQEIYDRQ
LAQFSVMEKGLKDATATYQAAKTLQDSNQEVFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAISVLEQIGE
NRMVGVISHVDDMKEGIAQQLVIIKSHDGSSRIKIVDKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtccagttagaattgaccaattttggaccatatcgtaaggaagttattaat
ttcactcagtttgaccatgctcccctctttttgattggaggggacacaggggctggtaag
agtactctctttgatgccatgacggtagccttgtttgctacgaccagtggtgatcgtaat
gttgaggagatgcggtcaactttcgctggtccagaggatgatttgaccaaggtgactttc
tatttccaacaaggcaatcacctttatcgcattgaccgagttctccagcaagagagggcc
aagcagggtgggggcactaccatgcaaaaggcgacggcttctctagtcattgtggataag
attggtggtcaggaaattgaaaagcttggggataagatcaaggaagtgagtgaccagatt
gagcagattttggggctcaatgctgagcagttcaaacagattatcctcttaccgcaaaat
gattttagtcgttttttgaaggaagattccaagactaagactcaaattttaaagaaaatc
tttgggacaggtatctttgaccgttttcaaaagagtttggaagagcgtcttcgtcagagc
aataaggatatggataagcgtcaggctcagctagatagccactttgccagtcaggtttgg
tcggaggaagaattagctgtcttggcgtcaacgccagcctctgaaaaattggcacgtctt
gaagagtttttgtctcagcgtcaagaaagtcttacagagcaaaaaagtatcttgaaggct
gcccacgaggatttggcacaactgcagaagagcttgcaaactgcccaagatttggcaaag
atttttcaagaattggagcaagccaaggaacgttaccgtctggaaattgaggagggggct
caaggacaggcagaggcaaaagtgcatctggaggaattacagtttgctcaaggtctgcag
gaaaccattcggaccttgaagcagtatcggaaacagttgatgcaattagagcaggacctt
gaaattgctcaagaagccttaagtgaaaagcaacaggcgtttgaggatgttaaggctaaa
aaagaggaactcacagttcaatctaaggattttcttcaaaaagaagaggagcttgaaact
tggaaagagaatattatctatgcccagagtcttgcccaagaacaggagaaaatcaaacgt
tcaacgactaactacaagcagttggaagagacctatcagcaggctagaaaagaggttgag
atgcttaacaagtccttgtctgacttggaggctaatcgtcttagtttagatagtttacat
gaggccgaaaaactcttccagattgtgggctacagtgtggagaatcaacttgctcaggac
ctgaaagaaatagagaacttgaatcaggagttgacaaagaccgaaaaacgtcatcaaacg
ttatcttttgatattgatcaagctcaagaaattctcaaagaattggaagaggagttaaga
aggactttggtttcacgccgtcaactcatgattgtccaactgcaggcagagttagaggag
gggcatccttgtatggtttgtggtgctctggaacaccctaatgttggtggagcacaggct
gatgaagtggccttgaaaaatctcatggatcaggtggagaagcttcaagctcaaaaagaa
aagcaagtcgctactttatcaaatcgtcaggctaccttgagtgaagttgcatctaaacgt
caggatttgcttgaccaagtggctaaagtcaaggcaactcttgaaaagcactatcaagaa
ttagaagagcacgttaagggacggtttgattttgatttttcgatagactatgaaactgac
cgtgggcaagccctactcctgaaggttgagcagtattatcaagagttacaaaaacgttat
gataaggaagagacagattatatccgatatcaagatgagctaggtaaggctcaaaaaaaa
gcgacagatttggctaaaacctatcaagaggccaaggcagtgcttgaccaagctcaagaa
cgcctagaggacctgcaggaagctcatccagaacttgagtctgttgaggtatatcaagaa
cggatttcccttgctcatcaggagctgaacctctacaataagcaagtcaaggaaaatagc
gaagcctacaaccaacttcatgccgacattaaaggaatcaaggggcagattgagagtata
actaagtctaaagataaggtaaatcaagatgttaagcgattatctgctgaattagagcaa
agtctcaaggctgaaggagccctcgctaatgacttagagcaggtcgaactctggcttatt
gaggtaaataatcaagctattcctatgcttcaggccaaattaacgacctatgcaacgctc
aaacaagaattacaggcgcagattcgtaaggggcaagagcttctccaaaatcaagaacaa
ccagatctcgatagtctagcgcaagcagtacagaattgtcaagaaatctatgataggcag
ctcgctcagttttctgtcatggaaaagggacttaaggatgcgacggctacctaccaagcg
gctaaaacccttcaagacagcaaccaagaggtctttaaggcccaccaagaactcagtgat
ttggttaaggtggttaagggagaaaatactgctctaactggtcgtcttaatcttgaggtc
tacgttatccgtcagtatttccaacaaatcttggactatgccaatgctaactacatcgga
ctattaacggataaccgctattcctttgttctaagtgaggaaggacgcagggcgcgtgat
cacttcggtttggatatcaacgtctatgaccagctgacaggtagtgaacgctccgttaaa
tccttgtctggtggtgaaacctttatcgctgcactggccattgccctatccctctcagaa
gttgtccaaaataccagcaagggtgccgttgttgaagcactcttcatcgacgaaggtttc
ggttcacttgataaggaagccctcaccaaggctatctctgtcctagaacaaatcggtgaa
aatcgcatggtcggtgtcatcagccacgtggacgatatgaaagaaggtattgctcagcaa
ctagttatcatcaagtcgcacgatggcagtagccgtattaaaattgtggataaggggtag
DBGET
integrated database retrieval system
