Streptomyces sp. CMC78: SCMC78_01890
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Entry
SCMC78_01890 CDS
T11197
Name
(GenBank) DEAD/DEAH box helicase
Organism
stcm Streptomyces sp. CMC78
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Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
AAA_22
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
BFP50382
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Position
198439..201513
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AA seq
1024 aa
AA seq
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MTHTTQVRGPPPREVEYPRRLRPLVKFEESDIAVHRHPAATPSEIADLSRCCAVFVPADP
ARTGRIAFWDPDGSTPSDTPGATSDLTVVGADLQPRTVSALHLPVRDALPVLTRARAAAH
ASPATAFWGAASLLALQFVARGLLLPGLSATDHDAWRIGPLGAEDLERIRELAASMPPTA
HAAPVPADGTAGEPFLPEPERLLRAFLDAVADTMPRTPAAGLVSAGPAFAARQPHHLPEG
RAWAADVAAGHDAGVRLSLRIEVMGVTSRASDADVTPEADSGAVRAGSGPDAVVPDAAAP
SFRAVLQIHSVSDPSLVADAAEVWAGGSRTATAFGPRARMDALLTLRRAARAWPPLAPLL
SAAVPDSVEPADEEIAELLGSASRALAAAGVQVHWPRELARKLTARAVIGPDDADSDDAD
STGRQGDGQRGRTAADVPSFLSADALLSFDWRFALGDRKLTREELDRLAESSRPIVRLRD
QWVLIDPEEARRARETQDRKVTPIDALGAVLTGSTEVDGRRVEVAATGWLQRLRDRLADP
ESAAQQAIGQPEALTATLRDYQLRGLNWLDTMTSLGLGACLADDMGLGKTITLIALHLHR
QSDRDAAGPTLVVCPTSLMGNWQREIERFAPGTPARRFHGASRSLEDLVDGEFVLTTYGT
MRLDAPRLAAVSWGMVVIDEAQHVKNPHSATAKQLRTLGARARVALTGTPVENNLSELWA
ILDWTTPGLLGRLGTFRTRYAAAVEGGDDPGAAERLAALVRPFLLRRRKSDPGIAPELPP
KTETDRAVSLTPEQTGLYEAVVRETLAEISAADGFERRGLVMKLLTALKQICNHPAQYLK
EEQPRIADRSGKIELLDELLDTILAEQGSVLVFTQYVQMARLLEEHLTARGVGTQFLHGG
TPVARREEMVARFQAGEAPVFLLSLKAAGTGLNLTRAGHVVHFDRWWNPAVEAQATDRAY
RIGQTQPVQVHRLIAEGTIEDRIAEMLARKQGLADAVLGSGEAALTELTDAELADLVELR
GGAR
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcacaccacacaggtgcgcggcccgccaccgcgtgaagtggagtaccctcggcga
ctccgcccactagtcaaatttgaggaatctgacatcgctgtgcacaggcaccctgcggca
acgccttccgagatcgccgacctttcccgctgctgcgcggttttcgtccccgcggatccg
gctcgtaccggcaggatcgcgttctgggatccggacggtagcaccccttccgacaccccc
ggggccacgtcggatctgactgtggtcggagccgacctgcagccccgtacggtttcggca
ctgcacctccccgtgcgggacgcgctgccggtgctgacccgggcgcgggccgccgcgcac
gcctcacccgccaccgccttctggggcgccgcctcgcttctggctctccagttcgtggcc
cgcggcctgctgctgccggggctgagcgccaccgaccacgacgcctggcgcatcggcccg
ttgggcgccgaggacctcgaacggatccgggagctggccgcgtcgatgccgccgaccgcg
cacgctgctccggtaccggccgacggcaccgcgggcgaaccgttcctgccggaaccggag
cgcctgctccgtgcgttcctcgatgccgtggccgacacgatgccccgtacacccgctgcc
ggtctcgtctccgccggccccgcgttcgccgcccggcagccgcaccatctgcccgagggg
cgggcctgggccgccgatgtggcggccggtcacgacgcgggtgtacggctctcgttgcgc
atcgaggtcatgggcgtgacctcgcgggcgagcgacgcggacgtgaccccggaggccgac
tcgggagcggtacgggcggggtccggtccggacgcggtcgttccggacgcggcagctccg
tcgttccgggccgtgctgcagatccacagcgtcagcgatccctcgctggtcgccgatgcg
gccgaggtgtgggcgggcggctcgcggaccgcgaccgcgttcgggccgcgagcccggatg
gacgccctcctcaccctgcggcgggcggcccgcgcctggcctccgctggcgccgttgctc
tccgccgcggtgccggactcggtggaaccggccgacgaggagatcgccgagctgctgggg
tccgcctcgcgtgccctggccgccgccggggtgcaggtgcactggcccagggagctggcc
aggaagctcaccgcgcgcgccgtgatcggcccggacgacgcggacagcgacgacgcggac
agcacgggccggcagggcgacgggcagcgcggacgtaccgccgcggacgtgccctcgttc
ctctccgccgacgccctgctctcgttcgactggcggttcgccctgggtgaccggaagctg
acccgcgaggagctggaccggctggccgagtcctccaggcccatcgtgcggctgcgcgac
cagtgggtgctcatcgaccccgaggaggcgcgccgggcccgggagacccaggaccgcaag
gtcaccccgatcgacgcgctcggcgcggtgctgaccggttcgacggaggtggacggccgc
cgtgtcgaggtggcggcgaccggctggctccagcggttgcgggaccggctggccgatccg
gagtccgccgcccagcaggcgatcggtcagcccgaggcgctcaccgcgaccctgcgcgac
taccagctgcgcggtctgaactggctcgacacgatgacctcgctcggcctcggcgcctgt
ctcgccgacgacatgggcctcggcaagacgatcacgctcatcgccctgcatctgcaccgg
cagagcgaccgcgacgcggcaggaccgacgctggtggtgtgcccgacgtcgttgatgggc
aactggcagcgggagatcgagaggttcgctccgggcacccccgcccgccgcttccacggc
gcgtcgcgttccctggaagacctggtggacggcgagttcgtcctgacgacatacggcacg
atgcgcctggacgcgccccggctcgccgccgtgtcctggggcatggtggtcatcgacgag
gcgcagcacgtcaagaacccgcactcggcgacggccaagcagctgcggaccctcggggcg
cgtgcacgcgtcgcgctcaccggcacccccgtcgagaacaacctgtccgagctgtgggcg
atcctggactggacgacgcccggtctgctcggccggctcggcaccttccgtacgcggtac
gccgccgcggtcgagggcggcgacgacccgggcgccgccgagcgactcgcggcgttggtg
cggccgttcctgctgcgccgccggaagtccgacccggggatcgcgcccgagctgccgccg
aagaccgagaccgaccgggccgtgtcgctgacgccggagcagaccggtctctacgaggcg
gtggtccgagagaccttggcggagatctccgccgccgacggtttcgagcggcgcggtctc
gtgatgaagctgctgacggcgctgaagcagatctgcaatcacccggcgcagtacctcaag
gaggagcagccgaggatcgcggaccggtcggggaagatcgagctgctggacgaactcctg
gacacgattctggccgagcagggttcggtgctggtcttcacgcagtacgtgcagatggcc
cggctgctggaggagcatctgaccgcgcgcggagtgggcacgcagttcctgcacggcggt
acgccggtggcccgccgcgaggagatggtggcccgcttccaggcgggcgaggcaccggtg
ttcctgctgtccctcaaggcggcgggcaccgggctcaacctcacccgggccggtcatgtc
gtgcacttcgaccgctggtggaatccggcggtcgaggcgcaggcgacggaccgggcgtac
cggatcggccagacgcagccggtgcaggtgcaccggctgatcgccgagggcacgatcgag
gaccggatcgccgagatgctcgcccgtaagcagggcctcgcggacgcggtgctcggctcc
ggcgaggcggcgctgaccgaactgaccgatgcggaactggccgacctggtcgagctgcga
gggggcgcacgatga
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