Streptomyces sp. CMC78: SCMC78_07510
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Entry
SCMC78_07510 CDS
T11197
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stcm03000
]
SCMC78_07510
Transcription factors [BR:
stcm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SCMC78_07510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
TetR_N
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
BFP50944
UniProt:
A0AB33K5R0
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All DBs
Position
complement(801681..802646)
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AA seq
321 aa
AA seq
DB search
MAKESSHRVVMIVSAGSNPFEMGVATELFGLRRPELPVDWYDFTLCSPTPTVRMHSGFFQ
LSDVPGLSAVDRADTVIVPNRPDPLEEPDPDVLAAIRRAHARGARLVSFCTGAFTLAAAG
VLDGRRATTHWRWADSFTARYPRVDLDPNVLFVDDGQMITAAGSAAALDTGLHLIRADHG
AETAAAVSRRLVHPAHRDGGQRQFVEHPVPGTADASLAPLLDWATEHLADGLDVAALAAH
AAVSPATLHRRFRAQLGTTPLAWLTEQRVTLARRLMERGEERLDVIARASGLGTATSLRT
QLRRRTGLTPTEYRRRFAPAP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaatcctcgcaccgggtggtgatgatcgtctcggccggttccaacccgttc
gagatgggtgtcgcgaccgagctcttcggcctgcgccggcccgagctgcccgtcgactgg
tacgacttcaccctctgctcgcccacccccacggtccgcatgcactccggcttcttccag
ctctccgacgtccccgggctgagcgccgtggaccgcgcggacaccgtcatcgtgcccaac
cggcccgacccgctggaggagcccgacccggacgtcctggcggcgatccggcgcgcccat
gcccgcggcgcacgcctcgtcagcttctgcaccggcgccttcaccctggccgccgccggg
gtgctggacggccggcgggccaccacgcactggcggtgggcggactccttcaccgcccgg
tacccacgggtcgatctcgacccgaacgtcctcttcgtcgacgacgggcagatgatcacg
gcggccggcagcgccgcggccctggacaccggcctgcacctcatccgcgccgaccacggc
gccgagaccgcggcggccgtcagcagacggctcgtccacccggcccaccgggacggtggc
cagcgccagttcgtcgagcaccccgtgcccggcaccgccgacgcctcgctcgcaccgctc
ctcgactgggccaccgagcacctggccgacggcctggacgtggcggccctcgccgcccac
gcggccgtcagccccgccaccctccaccgccgcttccgcgcccagctcggcaccaccccg
ctggcctggctcaccgagcagcgcgtcaccctcgcccgccgcctcatggagcgcggcgag
gaacgcctcgacgtgatcgcccgcgccagcggactcggtacggcgacgagcctgcggacc
cagctccgccgccgtaccggactgacgcccaccgaataccgccgccgcttcgccccggct
ccctga
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