Streptomyces sp. CMC78: SCMC78_14770
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Entry
SCMC78_14770 CDS
T11197
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stcm03032
]
SCMC78_14770
03400 DNA repair and recombination proteins [BR:
stcm03400
]
SCMC78_14770
Enzymes [BR:
stcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCMC78_14770
DNA replication proteins [BR:
stcm03032
]
Prokaryotic type
DNA Topoisomerases
SCMC78_14770
DNA repair and recombination proteins [BR:
stcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCMC78_14770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
DarA_N
Motif
Other DBs
NCBI-ProteinID:
BFP51670
UniProt:
A0AB33KJF5
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Position
1610723..1613176
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AA seq
817 aa
AA seq
DB search
MARRSTKTPPPDDFEEKILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGMKPVHRRIVS
QMNEMGLRPDRGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPLVDGHGNFG
SLGNDDPPAAMRYTECRMADATSLMTEAIDEDTVDFQSNYDGQEREPVVLPAAYPNLLVN
GVSGIAVGMATNMPPHNLGEVIAAARHLIKHPGADVETLMRYVPGPDLPTGGRIVGLGGV
KDAYTNGRGTFKIRATVSVENVTARRKGLVVTELPFTVGPEKVIAKIKDLVSAKKLQGIA
DVKDLTDRAHGLRLVIEVKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLKE
LLEVYLDHRFEVVRRRSEFRRTKRRDRLHLVEGLIVALLDIDEVIRIIRDSDNSAQAKER
LMAHFSLSEIQTQYILDTPLRRLTRFDRIELESERDKLNGEIEALTAILESDAELRKLVS
SELAAVAKKFGTDRRTVLLESAGSQVASVPLEVADDPCRVLLSSTGLLARTANADPVEIS
EDARRTKHDVIVSAVAATARGDVGAVTSTGRLLRISVIDLPQLPDTHAEPNLSGGAQISE
FLSLEADEELICLTTLDEASPGLAIGTLQGVVKRVVPDYPANKDELEVITLKDGDRIVGA
TELRTGEEDLVFITSDAQLLRYPAAQVRPQGRPAGGMAGVKLAAGAEVLSFTAVDPAAEA
IVFTVAGSHGTLDDSVLTSKLTPFDQYPRKGRATGGVRCQRFLKGEDVLVFAWAGPTPAR
AAQQNGTPARLPEPDPRRDGSGTPLLEKVAVIAGPPL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgtagcacgaagaccccgccgccggacgacttcgaggagaagatcctcgac
atcgacgtcgtcgacgaaatgcagggctccttcctcgagtacgcgtactcggtgatctac
tccagggccttgcccgacgcccgcgacggcatgaagccggtgcaccggcgcatcgtgtcc
cagatgaacgagatgggactgcgccccgaccgcggctatgtgaagtgcgcccgcgtcgtc
ggcgaggtgatgggcaagctgcacccgcacggcgacgcctcgatctacgacgccctggtg
cgcatggcgcagccgttctcgatgcggctccccctggtcgacggccacggcaacttcggc
tccctcggcaacgacgacccgccggccgccatgcggtacaccgagtgccggatggccgac
gccacctcgctgatgaccgaggccatcgacgaggacaccgtcgacttccagtcgaactac
gacggccaggagcgcgagccggtcgtcctccccgccgcctaccccaacctcctggtcaac
ggggtctccggaatcgccgtgggcatggccaccaacatgcccccgcacaatctgggcgag
gtcatcgccgccgcccggcatctgatcaagcacccgggcgccgacgtcgagacgctgatg
cgttacgtccccggacccgacctgcccaccggtggccgcatcgtcgggctgggcggcgtc
aaggacgcgtacacgaacggccgcggcacgttcaagatccgcgccaccgtctccgtggag
aacgtgacggcccgccgcaagggtctcgtcgtcaccgaactgcccttcaccgtcggcccg
gagaaggtgatcgccaagatcaaggacctggtctcggcgaagaagctccagggcatcgcc
gacgtcaaggacctcaccgaccgggcgcacggcctgcgtctggtcatcgaggtcaagaac
ggcttcgtgccggaagcggtgctggagcagctctacaagctgacgccgatggaggagtcc
ttcggcatcaacaacgtggcgctggtcgacggccagccgctcaccctgggcctcaaggag
ctgctggaggtctatctcgaccaccgcttcgaggtggtgcgccggcgcagcgagttccgc
cgcaccaagcgccgcgaccggctgcacctggtcgagggcctgatcgtcgccctgctcgac
atcgacgaggtcatccggatcatccgggacagcgacaactccgcgcaggcgaaggagcgc
ctgatggcgcacttctcgctgagcgagatccagacgcagtacatcctggacaccccgctg
cgccggctcacccgtttcgaccggatcgagctggagagcgagcgcgacaagctcaacggc
gagatcgaggcgctgaccgcgatcctggagtcggacgcggagctgcgcaagctggtctcc
tcggagctggcggcggtggcgaagaagttcggcacggaccggcgcacggtgctgctggag
tcggccggttcgcaggtcgcgtccgtgccgctggaggtggcggacgacccgtgccgggtg
ctgctgtcctcgacgggtctgctggcccgtacggcgaacgcggacccggtggagatctcc
gaggacgcccggcggaccaagcacgatgtgatcgtgtcggcggtggcggcgacggcccgg
ggggatgtcggggcggtcacgtcgaccggccggctgctgcggatctcggtcatcgacctg
ccgcagctgccggacacgcacgcggagccgaatctctccggcggggcgcagatctccgag
ttcctcagcctggaggcggacgaggagctgatctgcctcacgacgctcgacgaggcctcg
ccgggtctggcgatcggcacgctccagggcgtggtgaaacgcgtcgtgccggactacccg
gccaacaaggacgagttggaggtcatcaccctcaaggacggtgaccggatcgtcggcgcg
accgagctgcgcaccggcgaggaggatctggtgttcatcacctccgacgcccagttgctg
cgctacccggcggcccaggtacgcccgcaggggcggcccgccggaggcatggcgggcgtc
aagctggcggccggggccgaggtgctgtcgttcacggcggtggacccggcggccgaggcg
atcgtgttcacggtggccggctcgcacggcacgctggacgactcggtgctgacgtcgaag
ctgaccccgttcgaccagtatccgcgcaagggccgggcgaccggcggtgtgcgctgccag
cggttcctgaagggcgaggacgtcctggtgttcgcctgggcgggtcccaccccggcccgg
gccgcccagcagaacggcaccccggcgaggctgccggagccggacccgaggcgggacggt
tcgggcacgccgctgctggagaaggtggccgtgatcgcgggaccgccgctgtag
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