Streptomyces sp. CMC78: SCMC78_15210
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Entry
SCMC78_15210 CDS
T11197
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm00300
Lysine biosynthesis
stcm00470
D-Amino acid metabolism
stcm01100
Metabolic pathways
stcm01110
Biosynthesis of secondary metabolites
stcm01120
Microbial metabolism in diverse environments
stcm01230
Biosynthesis of amino acids
Module
stcm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCMC78_15210 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCMC78_15210 (dapF)
Enzymes [BR:
stcm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SCMC78_15210 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
GATase_4
Motif
Other DBs
NCBI-ProteinID:
BFP51714
UniProt:
A0AB33KE38
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Position
complement(1665699..1666571)
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AA seq
290 aa
AA seq
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MSTSQIAFLKGHGTENDFVIVPDPDNALTLPAAVVARLCDRRAGIGGDGLLHVVRSAAHP
EARDMAETAEWFMDYRNADGSIAEMCGNGVRVFAHYLQRAGLVEEGDLTVATRGGPKRVH
LAKNGDITVSMGRAVLPDESVTVTVGDRSWPARNVNMGNPHAVAFVDDLDQAGDLFTAPP
ISPEAVYPEGVNVEFVVDRGPRHVGMRVHERGSGETRSCGTGACAVAVATARRDGADPAG
TGLPVTYRVDLPGGTLVITEHPDGSIDMTGPAVIVAEGVIDPAWLDTVTD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacctcgcagatcgccttcctcaagggtcacggcaccgagaacgacttcgtgatc
gtcccggacccggacaacgccctcacgctgcccgccgccgtcgtcgcccggctctgcgac
cgccgggccggtatcggcggcgacggtctgctgcacgtcgtgcggtccgcagcgcacccc
gaggcacgggacatggcggagaccgccgagtggttcatggactaccgcaacgcggacggc
tcgatcgccgagatgtgcggcaacggcgtgcgcgtcttcgcccactacctccagcgcgcc
ggcctcgtcgaggagggcgacctcaccgtcgccacccggggcggacccaagcgggtgcac
ctcgccaagaacggcgacatcaccgtctccatggggcgcgccgtgctgcccgacgagagc
gtcacggtcaccgtcggcgaccgcagctggcccgcccgcaacgtcaacatgggcaacccc
cacgcggtcgccttcgtcgacgacctcgaccaggccggtgacctgttcaccgccccgccc
atcagccccgaggccgtctaccccgaaggcgtcaacgtcgagttcgtcgtcgaccggggc
ccgcgccacgtcggtatgcgcgtccatgagcggggctccggcgagacccgctcctgcggc
accggcgcctgcgcggtcgccgtcgccaccgcccgccgtgacggcgccgatcccgccggg
accggcctccccgtgacgtatcgggtggacctccccggcggcaccctcgtcatcaccgag
caccccgacggctcgatcgacatgaccggccccgccgtgatcgtcgccgagggcgtcatc
gacccggcctggctcgacaccgtcaccgactag
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