Streptomyces sp. CMC78: SCMC78_15980
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Entry
SCMC78_15980 CDS
T11197
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stcm03016
]
SCMC78_15980 (truB)
Enzymes [BR:
stcm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCMC78_15980 (truB)
Transfer RNA biogenesis [BR:
stcm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCMC78_15980 (truB)
Prokaryotic type
SCMC78_15980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BFP51791
UniProt:
A0AB33KCQ8
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All DBs
Position
complement(1767248..1768147)
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AA seq
299 aa
AA seq
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MTEQTTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVQRAT
KLLGHLALTEKEYLGTIRLGQDTVTDDAEGEITSSTDASGVTRDGIDAGVAALTGAIMQV
PSKVSAIKIDGKRSYARVRGGEEFEIPARPVTVSSFRVYDVREAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYGLDAARTLDQHQEALTVMPVAEAAA
TAFPRWDVDEKRAKLLLNGVRLDMPAHPQGPVAVFGPDGTFLVLVEEEKGKAKSLAVFA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagaccaccacgccggacggccttgtcatcgtcgacaagccgtccggcttc
acttcgcacgacgtcgtcgccaaaatgcgcggcatcgcccgcacccgccgcgtcggccac
gccggcaccctggacccgatggcgaccggagtgctcgtgctcggcgtccagcgggccacc
aagctgctcggtcacctcgcgctgaccgagaaggagtacctcggcacgatccggctcggc
caggacaccgtcaccgacgacgccgagggcgagatcacctcgtccaccgacgcctccggt
gtgacgcgtgacggcatcgacgcgggcgtggccgccctgaccggcgcgatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcgacggcaagcggtcctacgcgcgggtgcgcggc
ggcgaggagttcgagatcccggcccgcccggtgaccgtctcctccttccgggtctacgac
gtccgcgaggccgtcgccgaggacggcacccccgttctcgacctggtcgtctccgtcgtc
tgctcctccgggacgtacatccgggcgctggcccgcgacctcggcgccggactcggcgtc
ggcggccatctgaccgcgctgcgccgcacccgggtcggcccgtacggactggacgcggcc
cggacgctcgatcagcaccaggaggcgctgaccgtgatgccggtcgccgaggcggccgcc
accgcgttcccccgctgggacgtggacgagaagcgcgccaagctgctcctcaacggcgta
cggctggacatgcccgcgcatccgcaggggccggtcgcggtcttcgggcccgacggcacg
ttcctcgtgctcgtcgaggaggagaagggcaaggccaagagcctcgccgtcttcgcctga
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