Streptomyces sp. CMC78: SCMC78_16010
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Entry
SCMC78_16010 CDS
T11197
Name
(GenBank) hypothetical protein
KO
K02519
translation initiation factor IF-2
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
stcm03012
]
SCMC78_16010
03029 Mitochondrial biogenesis [BR:
stcm03029
]
SCMC78_16010
Translation factors [BR:
stcm03012
]
Eukaryotic type
Initiation factors
MTIFs
SCMC78_16010
Prokaryotic type
SCMC78_16010
Mitochondrial biogenesis [BR:
stcm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
SCMC78_16010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
EF-G_D2
IF2_N
MMR_HSR1
Ras
GTP_EFTU_D2
Roc
SRPRB
ATP_bind_1
Arf
FeoB_N
DUF4519
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BFP51794
UniProt:
A0AB33KDH3
LinkDB
All DBs
Position
complement(1769134..1772253)
Genome browser
AA seq
1039 aa
AA seq
DB search
MAKVRVYELAKEFGVESKVVMAKLQELGEFVRSASSTIEAPVVRKLTDALQGPGGNAGKS
AAKPGAPRKAAPAKPAAPSPAAAARPAAPKPGAPAPKPAAAEAPSSTPAAPSAPSAGPRP
GPKPAPKAAPVTPVPAAEFSAPAPAQPAAPQQPQAPRPAGATPGPRPAPARPAPSGGQRD
GGQRDGGRGGERGGDRPARPAGQGAPRPGGARPAGPRPGNNPFTSGGSTGMARPSAPRPG
GAPRPGGGQERPGAPRPQGSGPGGAPRPQGGQGQGGARPTPGGMPRPQAPRPGGGPAGNR
PNPGMMPQRPAAGPRPGGGPGGGRGPGGGGRPGGAGGGGRPGGGGFAGRPGGGGGGGFAG
RPAGPGGGGGAGRPGGGGGFGGRPGFGGRPGGPGGRGGTQGAFGRPGGPARRGRKSKRQR
RQEYEAMQAPSVGGVMLPRGNGQAVRLSRGASLTDFAEKINANPASLVAVMMNLGEMVTA
TQSVSDETLRLLAEEMNYVLEIVSPEEEDRELLESFDIEFGEDEGGEEALVSRPPVVTVM
GHVDHGKTRLLDAIRKTNVVAGEAGGITQHIGAYQVSSEVNGEDRKITFIDTPGHEAFTA
MRARGAKSTDIAILVVAANDGVMPQTIEALNHAKAADVPIVVAVNKIDVEGADPTKVRGQ
LTEFGLVAEEYGGDTMFVDISAKQGLNIEALLEAVVLTADASLDLRANPEQDAQGIAIES
HLDRGRGAVSTVLVQRGTLRIGDTVVVGDAYGRVRAMLDDSGQNVQEAGPSTPVLVLGLT
NVPGAGDNLLVVDEDRTARQIAEKRAARERNANFARKGVRFSLENLDEALKAGLVQELNL
IIKGDASGSVEALESSLLQLDVGEEVDIRILHRGVGAVTESDINLATGSDAIVIGFNVRA
AGRAEQMAEREGVDVRYYSVIYQAIEEIEAALKGLLKPEYEEVELGTAEIREIFRSSKLG
NIAGVLVRSGEVKRNTKARLLRDGKVIAENLNISGLRRFKDDVTEIREGFEGGINLGNFN
DIKIDDVIATYEMREKPRG
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaggtccgggtatacgaactcgccaaggagttcggcgtcgagagcaaggtcgtc
atggccaagctccaagaactcggtgaattcgtccgttcggcgtcctcgacgatcgaggcg
ccggttgtacgtaagttgaccgacgcactgcaggggcccggcggcaacgccggcaagtcc
gctgccaagcccggtgcgccccgcaaggcggcgcccgcgaagcccgcagcgccctccccg
gccgctgcggcacgtcccgctgcccccaagcccggcgcaccggctcccaagccggccgcc
gccgaggccccgagcagcaccccggcggcgccctccgcgccgtcggcgggcccccgtccg
ggcccgaagcccgcgccgaaggcggccccggtgaccccggtcccggccgccgagttctcg
gctccggctccggcccagccggctgccccccagcagccccaggccccgcgtcccgcgggc
gccaccccgggtccccgtcccgcccccgcccgtccggctccgtccggcggtcagcgcgac
ggtggccagcgtgacggcggccgtggcggcgagcgtggcggcgaccgccccgcacgtccc
gcgggccagggcgcaccgcgccccggcggcgcccgtccggccggtccccgtccgggcaac
aaccccttcacctccggcggttccaccggcatggcgcgcccctcggcgccccgtcccggc
ggtgccccgcgccccggtggcggccaggagcgccccggcgccccgcgcccccagggcagc
ggccccggcggcgccccgcgtccgcagggtggtcagggtcagggcggtgcccgtcccact
ccgggcggcatgccccgcccgcaggctccgcgtcccggcggcggtcccgccggtaaccgc
ccgaacccgggcatgatgccgcagcgtcccgccgcgggcccgcgtcccggtggtggcccc
ggcggtggccgtggtcccggcggtggcggtcgtcccggcggtgccggtggcggcggtcgt
cccggtggcggcggcttcgccggtcgtcccggtggcggtggcggcggcggcttcgccggt
cgtccggccggtcccggtggcggcggcggtgccggtcgtcccggtggcggcggcggcttc
ggcggtcgtcccggcttcggtggccgtccgggtggtcccggtggccgcggtggcacacag
ggtgcgttcggccgtcccggcggtccggcgcgtcgtggccgtaagtcgaagcggcagagg
cgccaggagtacgaggccatgcaggccccgtcggtcggcggcgtcatgctgcctcgcggc
aacggacaggccgtccggctgtcgcgcggcgcctcgctcaccgacttcgcggagaagatc
aacgccaacccggcgtcgctcgtcgccgtgatgatgaacctcggcgagatggtcaccgcc
acgcagtccgtttccgacgagacgctccggcttctcgccgaggagatgaactacgtcctg
gagatcgtcagccccgaggaggaggaccgcgagctgctcgagtccttcgacatcgagttc
ggcgaggacgagggcggcgaagaggctctggtctcgcgtccgccggtcgtgaccgtcatg
ggtcacgtcgaccacggtaagacccgactcctcgacgcgatccgcaagacgaacgtcgtc
gcgggcgaggccggtggcatcacccagcacatcggtgcctaccaggtctcctccgaggtc
aacggcgaggaccgcaagatcaccttcatcgacaccccgggtcacgaggcgttcaccgcc
atgcgtgcccgtggtgcgaagtcgaccgacatcgcgatcctcgtggtggcggccaacgac
ggtgtgatgccccagacgatcgaggcgctgaaccacgccaaggcggccgacgtgccgatc
gtggtcgcggtcaacaagatcgacgtcgagggcgccgacccgaccaaggtgcgcggtcag
ctcaccgagttcggtctggtggccgaggagtacggcggcgacacgatgttcgtcgacatc
tccgccaagcagggcctcaacatcgaggctctcctggaggccgtcgtcctcaccgccgac
gcctcgctcgacctgcgggccaacccggagcaggacgcgcagggtattgcgatcgagtcc
cacctcgaccgcggtcgcggtgccgtctcgaccgtcctggtccagcgcggaacgctgcgc
atcggcgacacggtggtcgtgggcgacgcgtacggccgtgtccgggcgatgctcgacgac
agcggtcagaacgtccaggaagcgggtccctcgacccccgtcctggtgctcggtctcacc
aacgtcccgggcgccggcgacaacctcctggtcgtcgacgaggaccgtacggcccgtcag
atcgccgagaagcgtgccgcccgtgagcgcaacgccaacttcgcccgcaagggcgtccgg
ttctccctggagaacctggacgaggcgctcaaggccggtctggtccaggagctcaacctc
atcatcaagggcgacgcgtccggttcggtggaggctctcgagtcctcgctgctccagctc
gacgtcggtgaagaggtcgacatccggatcctgcaccgcggtgtgggtgcggtcaccgag
tcggacatcaacctggcgacgggttccgacgccatcgtgatcggcttcaacgtgcgcgcc
gcagggcgtgccgagcagatggccgagcgcgaaggcgtggacgtccggtactactcggtc
atctaccaggcgatcgaagagatcgaagcggccctcaagggcctgctcaagccggagtac
gaagaggtcgagctcggcacggcggagatccgcgagatcttccgctcgtccaagctgggc
aacatcgccggtgtgctggtccgctccggcgaggtcaagcgcaacaccaaggcgcgcctg
ctgcgcgatggcaaggtcatcgcggagaacctcaacatctccggtctgcgccgcttcaag
gacgacgtcaccgagatccgcgaaggcttcgagggcggtatcaacctcggaaacttcaac
gacatcaagatcgacgacgtcatcgcgacgtacgagatgcgcgagaagccgcgaggctga
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