Streptomyces sp. CMC78: SCMC78_16890
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Entry
SCMC78_16890 CDS
T11197
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCMC78_16890 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stcm03019
]
SCMC78_16890 (rnc)
03009 Ribosome biogenesis [BR:
stcm03009
]
SCMC78_16890 (rnc)
03036 Chromosome and associated proteins [BR:
stcm03036
]
SCMC78_16890 (rnc)
Enzymes [BR:
stcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SCMC78_16890 (rnc)
Messenger RNA biogenesis [BR:
stcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCMC78_16890 (rnc)
Ribosome biogenesis [BR:
stcm03009
]
Eukaryotic type
90S particles
RNase
SCMC78_16890 (rnc)
Prokaryotic type
rRNA processing factors
SCMC78_16890 (rnc)
Chromosome and associated proteins [BR:
stcm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SCMC78_16890 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BFP51882
UniProt:
A0AB33K7Z2
LinkDB
All DBs
Position
complement(1867145..1867969)
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AA seq
274 aa
AA seq
DB search
MSELSSAKKQADNVNTASSHTLLEGRLGYHLESALLVRALTHRSYAYENGGLPTNERLEF
LGDSVLGLVVTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGSFIRLGRGEEG
TGGRDKASILADTLEAVIGAVYLDQGLGAASELVHRLFDPLIDRSSNLGAGLDWKTSLQE
LTASESLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWREIS
AAAEARQAAEKSAADGGAADTPADPSPNTDAAPA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagttgtccagcgccaagaagcaggcagacaacgtcaacacagcctcgtcccac
acgcttctggaagggcggctcgggtatcacctcgagtccgcccttctggtgcgtgcgctg
acccaccgttcgtacgcatacgagaacggcggtctgcccaccaacgagcggctcgaattc
ctcggggattcggtgctcggcctggtggtcacggacacgctgtaccgcacccaccccgac
ctgcccgaaggccagctggccaagttgcgggccgcggtggtcaactcgcgtgcgcttgcg
gaagtgggccgcggcctcgaactcggctccttcatccggctcggccgaggtgaagagggc
acggggggccgggacaaggcttccatcctcgccgacacactggaagcagtgatcggcgcg
gtctatctcgaccagggcctcggcgcggcctcggagctggtccaccggctcttcgacccg
ctgatcgacaggtcctcgaacctcggcgccggcctggactggaagaccagcctccaggag
ctcaccgcgagcgagagcctcggagtccccgagtacctcgtcacggagaccggtccggat
cacgagaagaccttcactgctgccgctcgcgtcggtggtgtctcgtacggcaccggcacc
ggccgtagcaagaaggaagcggagcagcaggcggccgagtccgcctggcgcgagatcagc
gccgccgcagaggcacggcaggccgcggagaagtccgcggccgacggaggggccgccgac
acccctgccgacccgtcgccgaacacggacgccgctccggcctga
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