KEGG   Streptomyces sp. CMC78: SCMC78_16890
Entry
SCMC78_16890      CDS       T11197                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
stcm  Streptomyces sp. CMC78
Pathway
stcm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:stcm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SCMC78_16890 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stcm03019]
    SCMC78_16890 (rnc)
   03009 Ribosome biogenesis [BR:stcm03009]
    SCMC78_16890 (rnc)
   03036 Chromosome and associated proteins [BR:stcm03036]
    SCMC78_16890 (rnc)
Enzymes [BR:stcm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SCMC78_16890 (rnc)
Messenger RNA biogenesis [BR:stcm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SCMC78_16890 (rnc)
Ribosome biogenesis [BR:stcm03009]
 Eukaryotic type
  90S particles
   RNase
    SCMC78_16890 (rnc)
 Prokaryotic type
  rRNA processing factors
   SCMC78_16890 (rnc)
Chromosome and associated proteins [BR:stcm03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SCMC78_16890 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DND1_DSRM
Other DBs
NCBI-ProteinID: BFP51882
UniProt: A0AB33K7Z2
LinkDB
Position
complement(1867145..1867969)
AA seq 274 aa
MSELSSAKKQADNVNTASSHTLLEGRLGYHLESALLVRALTHRSYAYENGGLPTNERLEF
LGDSVLGLVVTDTLYRTHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGSFIRLGRGEEG
TGGRDKASILADTLEAVIGAVYLDQGLGAASELVHRLFDPLIDRSSNLGAGLDWKTSLQE
LTASESLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWREIS
AAAEARQAAEKSAADGGAADTPADPSPNTDAAPA
NT seq 825 nt   +upstreamnt  +downstreamnt
atgtctgagttgtccagcgccaagaagcaggcagacaacgtcaacacagcctcgtcccac
acgcttctggaagggcggctcgggtatcacctcgagtccgcccttctggtgcgtgcgctg
acccaccgttcgtacgcatacgagaacggcggtctgcccaccaacgagcggctcgaattc
ctcggggattcggtgctcggcctggtggtcacggacacgctgtaccgcacccaccccgac
ctgcccgaaggccagctggccaagttgcgggccgcggtggtcaactcgcgtgcgcttgcg
gaagtgggccgcggcctcgaactcggctccttcatccggctcggccgaggtgaagagggc
acggggggccgggacaaggcttccatcctcgccgacacactggaagcagtgatcggcgcg
gtctatctcgaccagggcctcggcgcggcctcggagctggtccaccggctcttcgacccg
ctgatcgacaggtcctcgaacctcggcgccggcctggactggaagaccagcctccaggag
ctcaccgcgagcgagagcctcggagtccccgagtacctcgtcacggagaccggtccggat
cacgagaagaccttcactgctgccgctcgcgtcggtggtgtctcgtacggcaccggcacc
ggccgtagcaagaaggaagcggagcagcaggcggccgagtccgcctggcgcgagatcagc
gccgccgcagaggcacggcaggccgcggagaagtccgcggccgacggaggggccgccgac
acccctgccgacccgtcgccgaacacggacgccgctccggcctga

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