Streptomyces sp. CMC78: SCMC78_17690
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Entry
SCMC78_17690 CDS
T11197
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCMC78_17690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stcm02000
]
SCMC78_17690
Transporters [BR:
stcm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SCMC78_17690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BFP51962
UniProt:
A0AB33KBA3
LinkDB
All DBs
Position
complement(1947915..1949594)
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AA seq
559 aa
AA seq
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MSVRRRTTLRAVAAATVVVALAAGCSNANSGANKGGGAASGVLTLGKPDGPQTNNSNPFL
NTSAGAVLGYRYMIYEPLAMTNMIKPTEKADPWLATEWAWEDNFTKVTFTLDDRAKWADG
KPLTAADVEFTFNLLKKHPALNGNGIPFDGIAVEGKKVILTFKESQFVNQNKIIQTFVVP
KHIWEKVDNPETWPNRTPVGSGPYKLKTFTPQTTTLTATPSYWNGTTKVKELRYTAYNDN
SAATTALATGKVEWSFVFMPNHKQLFIDKDPKNHQLWFPSGLGIHGLWFNTARKPFDNPA
LRKAMAMVVDRKAIHIQAQATLYPEITNPTGIPLPAGEPFLAPEYQDATTKPDVAGAKKV
LSEAGFTLSGGVLKDPSGKPVKLTFTDPAGWNDYITGLAIIKDNIKELGIEAKVKTQTAE
AWGADVANGNFDATLHWTNSGATPYDMYQNIMDGAILQPIGKSSQTGNFGRFKSPEATAA
LKEYANATGDADRTKALNTLQKIFVEEAPVIPTAAAPIGAEYSTKNWIGWPTEANPYAPP
QHTQPTALEIVLNLKPASK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacgccgtcgcaccaccctcagagcggtcgccgcagccaccgtcgtggtcgcg
ctcgccgccggttgctcgaacgccaactcgggcgccaacaaggggggcggcgccgcgagc
ggcgtgctgaccctgggcaagccggacggaccgcagacgaacaacagcaacccgttcctc
aacacctcggcgggcgcggtcctcggctaccgctacatgatctacgagccgctggccatg
acgaacatgatcaagcccaccgagaaggccgacccctggctcgccaccgaatgggcctgg
gaggacaacttcaccaaggtcaccttcactctcgacgaccgggcgaagtgggccgacggc
aagcccctgaccgccgccgacgtggagttcaccttcaacctcctcaagaagcacccggcg
ctcaacgggaacggcatccccttcgacgggatcgccgtggagggcaagaaggtcatcctg
accttcaaggagtcccagttcgtcaaccagaacaagatcatccagaccttcgtcgtgccc
aagcacatctgggagaaggtcgacaacccggagacctggcccaaccgcaccccggtcggc
tccggaccgtacaagctcaagacgttcaccccgcagaccaccaccctgaccgccacgccg
agttactggaacggcaccaccaaggtcaaggagctgcgctacaccgcgtacaacgacaac
agcgccgccaccaccgcgctggccaccggcaaggtcgagtggtccttcgtcttcatgccg
aaccacaagcagctcttcatcgacaaggaccccaagaaccaccagctctggttcccctcc
ggcctcggcatccacggcctctggttcaataccgcccgcaagcccttcgacaacccggcg
ctgcgcaaggcgatggcgatggtcgtcgaccgcaaggccatccacatccaggcccaggcc
acgctctacccggagatcaccaacccgaccggcatcccgctgcccgccggtgagcccttc
ctcgcgcccgaataccaggacgccaccaccaagcccgacgtcgccggagccaagaaggtg
ctcagcgaggccgggttcaccctgagcggcggggtgctcaaggacccgtccggcaagccg
gtgaagctgaccttcaccgacccggccggctggaacgactacatcaccgggctcgcgatc
atcaaggacaacatcaaggaactcggcatcgaggcgaaggtcaagacgcagaccgccgag
gcctggggcgcggacgtcgccaacggcaacttcgacgccaccctgcactggaccaacagc
ggcgcgaccccctacgacatgtaccagaacatcatggacggggcgatcctccagcccatc
ggcaagagctcccagacgggcaacttcgggcgcttcaagagccccgaggccaccgccgcg
ctcaaggagtacgccaacgccaccggggacgcggaccgcaccaaggcgctcaacaccctc
cagaagatcttcgtcgaggaggccccggtcatcccgacggccgccgcgcccatcggagcc
gagtactccacgaagaactggatcggctggcccaccgaggccaacccgtacgccccgccg
cagcacacccagcccaccgccctggagatcgtgctcaacctcaagcccgcctccaagtag
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