KEGG   Streptomyces sp. CMC78: SCMC78_20050
Entry
SCMC78_20050      CDS       T11197                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
stcm  Streptomyces sp. CMC78
Pathway
stcm03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:stcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SCMC78_20050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stcm03400]
    SCMC78_20050
DNA repair and recombination proteins [BR:stcm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SCMC78_20050
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: BFP52198
UniProt: A0AB33KAL1
LinkDB
Position
complement(2228667..2229908)
AA seq 413 aa
MRSIWNGAISFGLVSIPIKLVNATENHSIHFRQIHLADGGRIRYRKVCELDEEEVGTGDI
GKAYEDADGTMIPITDEDLAQLPLPTAKTIEIVAFVPADQIDPLQMDAAYYLSANGVPAA
KPYTLLREALKRSNKVAVAKYALRGRERLGMLRVVDDVIAMHGLLWPDEIRAPEGVAPDG
DVTVRDAELDLADALMDTLGEVDMDSLHDDYREAVEELIAAKASGENVRPAEAEDAGGGK
VIDLIAALENSVQAARKSRGEQGADAQDADGGDGDGEMADVHPIKKTAGKSTGKSTGRSA
ARPAGKTSEGSTGKEPARSSGGTTKKTTHRTPTGKTVTRSGSSTTKKSAPKSTGAKKSTS
TAKKPSGSGARSGSSGSGGSRATGKKTAAKKQTSSSNGATAKKTTATRKRASA
NT seq 1242 nt   +upstreamnt  +downstreamnt
gtgaggtccatatggaacggcgcgatctccttcgggctggtcagcatcccgatcaagctg
gtcaacgccaccgagaaccactcgatccacttccggcagatccacctcgccgacggtggc
cggatccggtaccgcaaggtctgtgaactggacgaggaggaggtcgggaccggcgacatc
ggcaaggcctacgaggacgccgacggcacgatgatcccgatcaccgacgaggacctcgcc
cagctcccgctgcccacggcgaagaccatcgagatcgtcgccttcgtgcccgccgaccag
atcgacccgctccagatggacgcggcgtactacctctccgccaacggagtcccggccgcc
aagccgtacaccctgctccgcgaggccctcaagcgcagcaacaaggtcgccgtcgccaag
tacgcgctgcgcggccgcgaacggctcggcatgctccgcgtcgtcgacgacgtgatcgcc
atgcacggcctgctgtggccggacgagatccgcgcccccgaaggcgtcgccccggacggc
gacgtcacggtccgcgacgccgaactcgacctggcggacgccctgatggacacgctcggc
gaggtcgacatggacagcctccacgacgactaccgggaggcggtggaggaactcatcgcc
gcgaaggcctccggcgagaacgtgcgcccggccgaggccgaggacgccggcggcggcaag
gtcatcgacctgatcgcggccctggagaacagcgtgcaggcggccaggaagtcccggggc
gagcagggcgccgacgcacaggacgcggacggcggtgacggcgacggagaaatggccgac
gtccaccccatcaagaagaccgccgggaagtccaccgggaagtccaccggcaggtccgcc
gcgaggcccgccggaaagacctccgaagggtccaccgggaaggaaccggcgaggtcgtcc
gggggcaccacgaagaagaccacgcaccgcaccccgaccggcaagacggtcacccgctcc
ggaagctccacgacgaagaagtccgcccccaagtccaccggcgcgaagaagtccacatcg
acggcgaagaagccgtcgggaagcggtgcgcgttccgggagcagcggcagcggcggaagc
cgggcgaccggcaagaagaccgcggcgaagaagcagacgtcgtcgagcaacggcgccacg
gccaagaagacgaccgccacccgcaaacgcgcctcggcctga

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