Streptomyces sp. CMC78: SCMC78_20050
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Entry
SCMC78_20050 CDS
T11197
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SCMC78_20050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stcm03400
]
SCMC78_20050
DNA repair and recombination proteins [BR:
stcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SCMC78_20050
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BFP52198
UniProt:
A0AB33KAL1
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All DBs
Position
complement(2228667..2229908)
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AA seq
413 aa
AA seq
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MRSIWNGAISFGLVSIPIKLVNATENHSIHFRQIHLADGGRIRYRKVCELDEEEVGTGDI
GKAYEDADGTMIPITDEDLAQLPLPTAKTIEIVAFVPADQIDPLQMDAAYYLSANGVPAA
KPYTLLREALKRSNKVAVAKYALRGRERLGMLRVVDDVIAMHGLLWPDEIRAPEGVAPDG
DVTVRDAELDLADALMDTLGEVDMDSLHDDYREAVEELIAAKASGENVRPAEAEDAGGGK
VIDLIAALENSVQAARKSRGEQGADAQDADGGDGDGEMADVHPIKKTAGKSTGKSTGRSA
ARPAGKTSEGSTGKEPARSSGGTTKKTTHRTPTGKTVTRSGSSTTKKSAPKSTGAKKSTS
TAKKPSGSGARSGSSGSGGSRATGKKTAAKKQTSSSNGATAKKTTATRKRASA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtccatatggaacggcgcgatctccttcgggctggtcagcatcccgatcaagctg
gtcaacgccaccgagaaccactcgatccacttccggcagatccacctcgccgacggtggc
cggatccggtaccgcaaggtctgtgaactggacgaggaggaggtcgggaccggcgacatc
ggcaaggcctacgaggacgccgacggcacgatgatcccgatcaccgacgaggacctcgcc
cagctcccgctgcccacggcgaagaccatcgagatcgtcgccttcgtgcccgccgaccag
atcgacccgctccagatggacgcggcgtactacctctccgccaacggagtcccggccgcc
aagccgtacaccctgctccgcgaggccctcaagcgcagcaacaaggtcgccgtcgccaag
tacgcgctgcgcggccgcgaacggctcggcatgctccgcgtcgtcgacgacgtgatcgcc
atgcacggcctgctgtggccggacgagatccgcgcccccgaaggcgtcgccccggacggc
gacgtcacggtccgcgacgccgaactcgacctggcggacgccctgatggacacgctcggc
gaggtcgacatggacagcctccacgacgactaccgggaggcggtggaggaactcatcgcc
gcgaaggcctccggcgagaacgtgcgcccggccgaggccgaggacgccggcggcggcaag
gtcatcgacctgatcgcggccctggagaacagcgtgcaggcggccaggaagtcccggggc
gagcagggcgccgacgcacaggacgcggacggcggtgacggcgacggagaaatggccgac
gtccaccccatcaagaagaccgccgggaagtccaccgggaagtccaccggcaggtccgcc
gcgaggcccgccggaaagacctccgaagggtccaccgggaaggaaccggcgaggtcgtcc
gggggcaccacgaagaagaccacgcaccgcaccccgaccggcaagacggtcacccgctcc
ggaagctccacgacgaagaagtccgcccccaagtccaccggcgcgaagaagtccacatcg
acggcgaagaagccgtcgggaagcggtgcgcgttccgggagcagcggcagcggcggaagc
cgggcgaccggcaagaagaccgcggcgaagaagcagacgtcgtcgagcaacggcgccacg
gccaagaagacgaccgccacccgcaaacgcgcctcggcctga
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