Streptomyces sp. CMC78: SCMC78_21590
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Entry
SCMC78_21590 CDS
T11197
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm03420
Nucleotide excision repair
stcm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCMC78_21590
03430 Mismatch repair
SCMC78_21590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stcm03400
]
SCMC78_21590
Enzymes [BR:
stcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCMC78_21590
DNA repair and recombination proteins [BR:
stcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCMC78_21590
MMR (mismatch excision repair)
Other MMR factors
SCMC78_21590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFP52352
UniProt:
A0AB33KCH4
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Position
complement(2389258..2392746)
Genome browser
AA seq
1162 aa
AA seq
DB search
MSPRITDPEQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIAAGVTDPEAIDPDNPPGEPTISTYHAFAGRLL
TEHGLRIGLEPSTRLLADATRYQLAAKVLREAPGPYPALTRSFSTLVSDLLALDGELSEH
LVRPGTLETYDTELLRELATARLSNADLRKIPETAEARRSLLGLTERYRSAKRGRDLMDF
GDQIALSAELALTRPEVGAILREEFRVVLLDEYQDTSVAQRLLLSALFGSGTEPGAAGHA
VTAVGDPCQAIYGWRGASVANLDDFPEHFPHADGTPATRYSLSENRRSGGRLLQLANGLA
EPLRAMHEGVEALRPAPGAERDGAVRCALLNTHTEEIDWLADSLAHLVRTGTPPGEIAVL
CRTAGDFPEIQAALVARDIPVEVVGLAGLLHLPEVADLVAVCEVLQDPGANASLVRLLTG
PRWRIGPRDLALLGRRARLLVHRAGHGKEADADQRLADAVEGTDPAEVISLADALDTFLV
AADEGDDGLPFSAEARVRFARLARELRDLRRSLADPLMDVLHRVLATTGLEVELSASPQA
LAARRRETLANFLDTAARFASLDGEASLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLT
AHKSKGLEWDVVAVPGLVTGQFPSGQSRDAWTAQAKVLPHALRGDAATLPAVDSFDAKGL
KAFKEEMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKRTRGPSAFLDALYEHCAA
GHGEIEVWADEPAEDEENPALAERDADLAWPLPLDADALARRRAARDTVLAHLERLAVQG
DEQPPSYAPGPDDVPAHEPWDEEPPLDEPPADEDWDWDALPTERPPGTPETGPDPADTAH
EPVRQPAPEPEPAPHIPAARHPQEDPAGRLTPEEARTLASWDRDLDALAGELRRARATVR
EVHLPASLSATQLLRLAEDPDAFAQELARPMPRPPGAAARRGTRFHAWVESRYEELPLPL
LGPDELPGGDDNDTEIADERDLAELKEAFERTAYARRTPYRVETPFQITLAGRVIRGRID
AVYRTGDTYEIVDWKTTRHRTADPLQLAVYRLAWAELHDLPLDAVTATFLYVRSGETVRP
RRLPGRAELERILLDEPAPEDG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccgcgcatcaccgatcccgagcagctcaaggagctcctcggaatcccgttcacc
ccggagcagacggcctgcatcatcgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcgggcaagaccacggtgatggccgcccgcgtggtctggctggtgggcaccggccag
gtcgcgcccgaacaggtcctcggcctcaccttcaccaacaaggcggcgggcgagctggcc
gagcgcgtccgcaaggcgctgatcgccgccggggtcaccgaccccgaggccatcgacccg
gacaaccccccgggcgagcccaccatctccacgtaccacgccttcgccggccgcctcctc
accgagcacggtctgcgcatcggcctggagccctccacccgtctcctcgccgacgccacc
cgctaccagctcgcggccaaggtgctgcgcgaggccccgggcccctatccggcgctcacc
cgctccttctccaccctggtcagcgatctcctcgcgctcgacggcgagctgtccgaacac
ctcgtacggccggggacgctggagacgtacgacaccgagctgctgcgggagctggccacc
gccaggctcagcaacgccgacctgcgcaagatccccgagaccgccgaggcccgccgctcc
ctcctcggcctcaccgagcgctaccgatccgccaagcgcggccgcgacctcatggacttc
ggcgaccagatcgccctctccgccgagctggccctcacccggcccgaggtgggggcgatc
ctgcgcgaggagttccgggtcgtcctcctcgacgagtaccaggacacctcggtggcccag
cggctgctgctctcggcgctgttcggcagcggtacggagccgggggccgccggccacgcg
gtgacagccgtgggcgacccctgccaggcgatctacggctggcgcggcgcgtccgtcgcc
aacctcgacgacttccccgagcacttcccgcacgccgacggcacccccgccacccgctac
agcctcagcgagaaccgccgcagcggcggccgcctcctccagctcgccaacggcctcgcc
gaaccgctgcgcgcgatgcacgagggcgtcgaggcgctgcgccccgccccgggcgccgag
cgggacggcgcggtccgctgcgccctgctcaacacgcacaccgaggagatcgactggctc
gccgactcgctcgcccacctcgtgcgcaccggcaccccgcccggcgagatcgccgtcctg
tgccgcaccgccggggacttccccgagatccaggcggccctggtcgcccgggacatcccg
gtcgaggtcgtcggcctcgccgggctgctgcatctgcccgaggtggccgacctggtcgcc
gtctgcgaagtcctccaggaccccggggccaacgcctcgctggtccgcctgctcaccgga
ccgcgctggcgcatcggcccccgtgacctcgcgctcctcggccgccgcgcccgcctcctc
gtgcaccgggcgggccacgggaaggaggccgacgcggaccagcggctcgcggacgccgtc
gagggcacggacccggccgaggtgatatcgctcgccgacgcgctggacaccttcctggtc
gcggcggacgaaggggacgacgggctgccgttctccgccgaggcccgggtccgcttcgcc
cgcctcgcccgggagctgcgcgacctgcgccgctcgctcgccgaccccctgatggacgtg
ctgcaccgggtcctggccaccaccggactggaggtcgagctgtccgcctccccgcaggcg
ctcgccgcccgccgccgcgagacgctggccaacttcctggacacagcggcccggttcgcc
tcgctggacggcgaggcgtcgctgctcgccttcctcggcttcctgcggaccgccgcgcag
tacgagaagggcctcgacaacgcgctgcccggcggcgagaacaccgtcaaggtgctgacc
gcccacaagtccaagggcctggagtgggacgtcgtcgccgtccccggactggtcaccggc
cagttccccagcggccagtcccgggacgcctggaccgcccaggccaaggtgctcccgcac
gccctgcgcggcgacgcggcgacgctcccggccgtcgacagcttcgacgccaaggggctg
aaggcgttcaaggaggagatgaaggagcaccagcacacggaggaactgcgcctcggctac
gtcaccttcacccgcccccgctccctgctcctcggctccggccactggtggggcccgtcc
cagaagcggacgcgtggcccgtccgccttcctggacgcgctgtacgagcactgcgcggcg
ggccacggcgagatcgaggtctgggcggacgagcccgccgaggacgaggagaacccggcc
ctcgcggagcgcgacgccgacctggcctggccgctcccgctggacgccgacgccctcgcc
cgccgccgcgccgcccgcgacacggtgctggcccatctggaacgcctggccgtccagggg
gacgagcagccaccgtcgtacgcccccggacccgacgacgtaccggcgcacgaaccctgg
gacgaggagcctccgctcgacgagcccccggccgacgaggactgggactgggacgcgctc
cccaccgagcgccccccgggcacaccggagaccggaccggacccggcggacacggcccac
gagcccgtgcggcagcccgcaccggagcccgagcctgccccgcacatcccggccgcccgc
cacccgcaggaggacccggccgggcggctcacccccgaggaggcccgcaccctcgcctcc
tgggaccgggacctggacgcgctggccggggagctgcgccgggcccgcgccaccgtgcgc
gaggtccacctccccgcctcgctctccgccacccagctgctccgcctggccgaggacccc
gacgccttcgcccaggagctggcccggcccatgccccgtccgcccggtgccgccgcccgc
cggggcacccgcttccacgcctgggtggagtcgcgctacgaggaactgccgctgcccctg
ctcggccccgacgagctgcccgggggcgacgacaacgacacggagatcgccgacgagcgg
gacctcgccgagctgaaggaggcgttcgagcgcaccgcgtacgcccggcgcacgccgtac
cgcgtggagacccccttccagatcaccctggcgggccgggtgatccggggccggatcgac
gcggtgtaccgcacgggcgacacctacgagatcgtcgactggaagaccacccgccaccgc
accgccgacccgctccagctcgccgtctaccgcctcgcctgggccgaactgcacgatctg
ccgctcgacgcggtcaccgccaccttcctctacgtacgcagcggggagacggtccgaccg
cgacgactgcccggccgggccgagctggagcggatcctgctggacgagcccgcccccgag
gacggatag
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