Streptomyces sp. CMC78: SCMC78_25310
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Entry
SCMC78_25310 CDS
T11197
Symbol
trpS_1
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCMC78_25310 (trpS_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stcm01007
]
SCMC78_25310 (trpS_1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stcm03016
]
SCMC78_25310 (trpS_1)
Enzymes [BR:
stcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SCMC78_25310 (trpS_1)
Amino acid related enzymes [BR:
stcm01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SCMC78_25310 (trpS_1)
Transfer RNA biogenesis [BR:
stcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SCMC78_25310 (trpS_1)
Prokaryotic type
SCMC78_25310 (trpS_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Glu_cys_ligase
Motif
Other DBs
NCBI-ProteinID:
BFP52724
UniProt:
A0AB33KG34
LinkDB
All DBs
Position
complement(2798950..2800017)
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AA seq
355 aa
AA seq
DB search
MASDRPSLPTDQPQTGRTGAAARPRVLSGIQPTAGSFHLGNYLGAVRQWVALQESHDAFY
MVVDLHAITIPQDPAELRANTRLAVAQLLAAGLDPERCTLFVQSHVPEHAQLGWVMNCLT
GFGEASRMTQFKDKSAKQGADRATVGLFTYPVLQVADILLYQANQVPVGEDQRQHIELTR
DLAERFNGRYGQTFTVPAPYILKETAKIFDLQDPAVKMSKSASTPKGLVNLLDDPKVTAK
KVKSAVTDTDTVIRFDAEKKPGVSNLLSILSTLSGSPVEDLERSYEGKGYGALKTDLAEA
MVEFVTPFRTRTQEYLDDPETLDSILAKGAEKARAVAAETLAQTYDRMGFLPAKH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgaccgcccttcgctccccaccgaccagccgcagacgggccgcaccggtgcg
gccgcccgtccgcgcgtgctctccgggatccagcccaccgcgggctcgttccacctcggc
aactacctgggcgcggtgcgccagtgggtggcgctgcaggagagccacgacgccttctac
atggtcgtggacctgcacgcgatcacgatcccgcaggaccccgccgagctgcgggccaac
acccggctcgccgtggcgcagctgcttgcggccggtctggacccggagcgctgcacgctc
ttcgtccagagccatgtgcccgagcacgcccagctcggctgggtgatgaactgcctcacg
ggcttcggcgaggcctcccggatgacgcagttcaaggacaagtccgccaagcagggcgcc
gaccgggccaccgtcggtctcttcacctacccggtgctccaggtcgccgacatcctgctc
taccaggcgaaccaggtcccggtgggcgaggaccagcgccagcacatcgagctgacccgc
gacctcgccgagcggttcaacggccggtacggacagacgttcaccgtgcccgcgccgtac
atcctcaaggagacggcgaagatcttcgacctccaggacccggcggtgaagatgagcaag
tcggcctccacgccgaagggcctcgtcaacctgctggacgacccgaaggtcaccgccaag
aaggtgaagagcgcggtcaccgacaccgacacggtgatccgcttcgacgccgagaagaag
ccgggcgtcagcaacctgctctcgatcctctccaccctctccggcagccccgtagaggac
ctggaacggagttacgagggcaagggctacggtgcgctgaagaccgacctggccgaggcc
atggtggaattcgtcactcccttccggacccgcacccaggaatatctggacgacccggag
acgctggactccatcctggccaagggagcggagaaggccagggccgtcgcggcggagacg
ctggcacagacgtacgaccggatgggcttcctgcccgcgaagcactga
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