Streptomyces sp. CMC78: SCMC78_25620
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Entry
SCMC78_25620 CDS
T11197
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm03420
Nucleotide excision repair
stcm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCMC78_25620 (pcrA)
03430 Mismatch repair
SCMC78_25620 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stcm03400
]
SCMC78_25620 (pcrA)
Enzymes [BR:
stcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCMC78_25620 (pcrA)
DNA repair and recombination proteins [BR:
stcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCMC78_25620 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SCMC78_25620 (pcrA)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BFP52755
UniProt:
A0AB33KIZ4
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Position
complement(2835568..2838006)
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AA seq
812 aa
AA seq
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MSSLFDDSFLTGLQPAEDGPPPPPEDHAPEAVPEGLFEGVYDAPPPPRDGYYRDGHPRPV
IDSAALLDGLNTEQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAHLLAERGTHPGQILAI
TFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAADSK
RLMALVCRDLDLDPKRYPPKSFTAKVSNLKNELIDEETFAGQAADGFEKTLAQAYALYQA
RLREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLVRELVGP
AGENDAPAELCVVGDADQSIYAFRGATIRNILQFEEDYPSATTILLEQNYRSTQTILSAA
NAVIERNESRRPKNLWTNAGSGARITGYVADTEHDEAQFVADEIDRLTDAGDAKAGDVAV
FYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDTVPLRRILN
VPKRGIGDRAEAMIDALSLREKISFPQALRRVDEAYGMAARSSNAVKRFNTLMEELRTIV
ESGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQERGEEEGAGT
LAEFLEKVALVADSDQIPDEDEDGSGVITLMTLHTAKGLEFPVVFLTGLEDGVFPHMRAL
GQTKELEEERRLAYVGITRARERLYLTRAAMRSAWGQPSYNPPSRFLEEIPEQHLDWKRK
GPMAAPAGPTSGITSSLSSSRARTGPSGFATRRSSEKPTVTLVAGDRVTHDQFGLGTVTA
VEGFGDQAKATVDFGDERPKKLLLRYAPVEKL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagtttcctgaccggcctccagcccgcggaggacggcccc
ccgccgccccccgaggaccacgcgcccgaagcggtgccggagggactcttcgagggcgtc
tacgacgcgcccccgccgccccgggacgggtactaccgggacggtcacccgcgcccggtg
atcgactccgccgcgctgctcgacgggctgaacaccgagcagcgcgccgccgtcgtgcac
gccggatccccgctgctcatcgtcgccggggccggctccggcaagacccgggtgctgacc
catcgcatcgcccatctgctggccgagcgcggtacgcaccccgggcagatcctcgcgatc
accttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgaacagctcgtcgggccg
cgtgccaacgcgatgtgggtcatgaccttccacagcgcgtgcgtccgcatcctgcgccgc
gagtcgaagaagctcggcttcacctcgtcgttctcgatctacgacgccgccgactccaag
cggctgatggccctggtctgccgcgatctggacctggaccccaagcgctatccgccgaag
tccttcaccgccaaggtctccaacctcaagaacgagctcatcgacgaggagaccttcgcc
ggacaggccgccgatggtttcgagaagaccctggcccaggcctacgcgctttaccaggcc
cggctgcgcgaggccaacgccctggacttcgacgacatcatcatgacgacggtccacctc
ctccaggccttcccggacgtcgccgagcactaccgccgccgcttccgccacgtcctggtc
gacgagtaccaggacaccaaccacgcccagtacacgctggtccgtgagctggtcggcccg
gccggcgagaacgacgcccccgccgagctgtgcgtggtcggtgacgcggaccagtcgatc
tacgccttccggggcgcgaccatccgcaacatcctccagttcgaggaggactaccccagc
gccacgacgatcctgctggagcagaactaccgctccacgcagacgatcctctccgccgcc
aacgccgtcatcgagcgcaacgagagccgccgccccaagaacctctggaccaacgccggc
tccggcgcccgcatcaccggctacgtcgccgacaccgagcacgacgaggcgcagttcgtc
gccgacgagatcgaccggctcaccgacgcgggcgacgccaaggcgggcgacgtcgccgtc
ttctaccgcaccaacgcccagtcccgtgtcttcgaagagatcttcatccgcgtcggcctg
ccctacaaggtcgtcggcggtgtgcgcttctacgagcgcaaggaggtccgggacgtcctg
gcctacctccgcgtcctcgccaaccccgaggacaccgtcccgctgcgccgcatcctcaac
gtccccaagcggggcatcggcgaccgcgccgaagcgatgatcgacgccctgtcgctgcgc
gagaagatctccttcccgcaggcgctgcgccgcgtcgacgaggcgtacggcatggccgcc
cgctcctccaacgccgtcaagcgcttcaacacgctgatggaggagctgcgcacgatcgtc
gagtccggcgccggacccgccgtcgtgctcgaggcggtcctggagcgcacgggctatctc
gccgagctccaggcctccacggacccgcaggacgagacccgtatcgagaacctccaggaa
ctcgccgccgtcgccctcgaattcgagcaggaacgcggcgaggaggagggcgcgggcacg
ctcgcggagttcctggagaaggtcgcgctcgtcgccgactccgaccagatccccgacgag
gacgaggacggctccggcgtcatcacgctgatgaccctgcacaccgcgaagggcctggag
ttccccgtcgtcttcctcaccggcctggaggacggcgtcttcccgcacatgcgggccctc
ggccagaccaaggagctggaggaggagcgccgcctcgcgtacgtcggcatcacccgcgcc
cgcgaacggctctacctgacccgggccgcgatgcgcagcgcctggggccagccctcgtac
aacccgccctcgcggttcctggaggagatcccggaacagcacctggactggaagcgcaag
ggcccgatggccgcgcccgccggaccgacctccggcatcacgtcctcgctctcctcctcc
cgcgcccgcaccggcccctcgggcttcgcgacccggcgctcctcggagaagccgacggtc
accctggtggccggggaccgggtcacgcacgaccagttcgggctcggcacggtgacggcc
gtcgagggcttcggcgaccaggccaaggcgacggtcgacttcggcgacgagcgcccgaag
aagctgctgctgcggtacgcgccggtcgagaagctgtag
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