Streptomyces sp. CMC78: SCMC78_26020
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Entry
SCMC78_26020 CDS
T11197
Symbol
groL_1
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCMC78_26020 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stcm03019
]
SCMC78_26020 (groL_1)
03110 Chaperones and folding catalysts [BR:
stcm03110
]
SCMC78_26020 (groL_1)
03029 Mitochondrial biogenesis [BR:
stcm03029
]
SCMC78_26020 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stcm04147
]
SCMC78_26020 (groL_1)
Enzymes [BR:
stcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SCMC78_26020 (groL_1)
Messenger RNA biogenesis [BR:
stcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SCMC78_26020 (groL_1)
Chaperones and folding catalysts [BR:
stcm03110
]
Heat shock proteins
HSP60 / Chaperonin
SCMC78_26020 (groL_1)
Mitochondrial biogenesis [BR:
stcm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SCMC78_26020 (groL_1)
Exosome [BR:
stcm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCMC78_26020 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
SCMC78_26020 (groL_1)
Exosomal proteins of breast cancer cells
SCMC78_26020 (groL_1)
Exosomal proteins of colorectal cancer cells
SCMC78_26020 (groL_1)
Exosomal proteins of bladder cancer cells
SCMC78_26020 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BFP52795
UniProt:
A0AB33KME3
LinkDB
All DBs
Position
complement(2886974..2888599)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
LDDPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSEELLATARPIDDKSDIAAVAALSAQDTQVGELIADAMDKVGKDGVITVEESNT
FGLDLEFTEGMAFDKGYLSPYMVSDQERMEAVLDDPYILIHQGKIGSIQELLPLLEKVIQ
AGASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDIATLTGATV
IAEEVGLKLDQAGLDVLGTARRVTVSKDDTTIVDGGGNTEDVKGRVNQIKAEIESTDSDW
DREKLQERLAKLAGGVCVIRVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSAIV
HAVKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVSELDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEEEADAGHGGHGHS
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgctcccaccatcaccaacgacggtgtcaccatcgcgcgcgaggtcgag
ctcgacgacccgtacgagaacctcggtgcccagctcgtcaaggaggtggcgaccaagacc
aacgacgtagcgggtgacggcaccaccaccgcgaccgtcctggcccaggcgctcgtccgc
gagggtctgcgcaacgtcgccgccggcgcctccccggccgccctgaagaagggcatcgac
gccgccgtcaaggccgtgtccgaggagctcctcgccaccgcccgcccgatcgacgacaag
tccgacatcgccgccgtggccgcgctctccgcgcaggacacccaggtcggcgagctcatc
gcggacgcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggacctggagttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtgtccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctgatc
caccagggcaagatcggctcgatccaggagctgctgccgctcctggagaaggtcatccag
gccggcgcctccaagccgctcctgatcatcgccgaggacgtcgagggcgaggcgctctcc
accctcgtcgtcaacaagatccgtggcaccttcaacgccgtcgcggtgaaggccccgggc
ttcggcgaccgccgcaaggccatgctcggcgacatcgccaccctcaccggtgcgaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctcggcaccgcc
cgccgcgtcaccgtctccaaggacgacacgaccattgtcgacggcggtggcaacaccgag
gacgtcaagggccgcgtcaaccagatcaaggccgagatcgagtccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgtgtcatccgc
gtcggcgccgccaccgaggtggagctcaaggagaagaagcaccgcctcgaggacgccatc
tccgccacccgcgccgcggtcgaggagggcatcgtctccggcggtggctccgccatcgtc
cacgccgtgaaggtcctggagggcaacctcggcaagaccggcgacgaggccaccggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctg
gagggttacgtcatcacctccaaggtctccgagctcgacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcgtccatcgcgtcgctgctgctcacgaccgagaccctg
gtcgtcgagaagccggccgaggaagaggccgacgccggtcacggcggccacggccactcc
cactag
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