Streptomyces sp. CMC78: SCMC78_34780
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Entry
SCMC78_34780 CDS
T11197
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stcm03021
]
SCMC78_34780
Transcription machinery [BR:
stcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCMC78_34780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
HTH_Crp_2
NirdL-like_HTH
HTH_5
HTH_3
MarR
DUF134
DUF7343
HVO_2718
Motif
Other DBs
NCBI-ProteinID:
BFP53671
UniProt:
A0AB33KGC9
LinkDB
All DBs
Position
3831339..3832193
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AA seq
284 aa
AA seq
DB search
MPPQTVQTVETVRAEDIQTETPDPSVRPARARGADTRALTQVLFGQLKNLEPGTPEHGRV
RDALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPERGVQFPTFAMPTV
VGEIKRYFRDNVRTVHVPRRLHELWVQVTGATEDLTTAHGRSPTTGEIAERLKISEDEVL
ACIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQRI
LLLRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgcctccccagaccgtccagaccgtcgagaccgtccgggccgaggacatccagaccgag
accccggacccctcggtccggcccgccagagcccgcggcgccgacaccagggcgctcact
caggtcctcttcggtcagctcaagaacctggagccgggcactccggagcacggccgggtc
cgggacgccctcatcgaggcgaacctccccctcgtgcggtacgccgccgcacggttccgc
agccgtaacgagccgatggaggacgtcgtccaggtcggcaccatcggtctgatcaacgcc
atcgaccggttcgatccggaacgcggggtccagtttccgaccttcgcgatgcccaccgtc
gtcggtgagatcaaacgttactttcgcgacaatgtgcgcaccgttcacgtcccccgccga
ctgcacgaactctgggtccaggtcaccggcgccaccgaggacctgacgaccgctcacggg
cggtcccccaccaccggcgagatcgccgagcggctgaagatctccgaggacgaggtgctc
gcctgcatcgaggccgggcgctcgtaccacgcgacctcgctggaggccgcccaggagggc
gacgggctgcccggactgctcgaccggctcggttacgaggatcccgcgctcgccggggtc
gagcaccgcgatctcgtacgccacctcctcgtccagcttcccgagcgtgagcagcgcatc
cttctcctgcgctactacagcaacttgacccagtctcagatcagcgccgagctcggcgtc
tcccagatgcatgtgtcaaggctcctcgcccgaagcttcgcccgactgagatccgcaaac
aggatcgaggcgtaa
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