Streptomyces sp. CMC78: SCMC78_36410
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Entry
SCMC78_36410 CDS
T11197
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stcm03032
]
SCMC78_36410 (gyrA)
03400 DNA repair and recombination proteins [BR:
stcm03400
]
SCMC78_36410 (gyrA)
Enzymes [BR:
stcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCMC78_36410 (gyrA)
DNA replication proteins [BR:
stcm03032
]
Prokaryotic type
DNA Topoisomerases
SCMC78_36410 (gyrA)
DNA repair and recombination proteins [BR:
stcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCMC78_36410 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BFP53834
UniProt:
A0AB33KJ77
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All DBs
Position
4008670..4011309
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AA seq
879 aa
AA seq
DB search
MADENTPVTPEPVTSEEETVPGVGMRVEPVGLETEMQRSYLDYAMSVIVSRALPDVRDGL
KPVHRRVLYAMYDGGYRPEKGFYKCARVVGDVMGTYHPHGDSSIYDALVRLAQPWSLRMP
LVDSNGNFGSPGNDPAAAMRYTECKMMPLSMEMVRDIDEETVDFQDNYDGRNQEPTVLPA
RFPNLLVNGSAGIAVGMATNIPPHNLREVAAGAQWYLEHPEASHEELLDALIERIKGPDF
PTGALVVGRKGIEEAYRTGRGSITMRAVVAVEEIQGRQCLVVTELPFQTNPDNLAQKIAD
LVKDGKVGGIADVRDETSSRTGQRLVVVLKRDAVAKVVLNNLYKHTDLQTNFGANMLALV
DGVPRTLSIDAFIRHWVTHQIEVIVRRTRFRLRKAEERAHILRGLLKALNAIDEVIALIR
RSNTVEIAREGLMGLLEIDELQANAILEMQLRRLAALEHQKITAEHDELQAKINEYNEIL
ASPAKQRAIVSEELAAIVDKFGDDRRSQLVPFDGDMSIEDLIAEEDIVVTISRSGYVKRT
KTDDYRSQKRGGKGVRGTKLREDDIVDHFFVSTTHHWLLFFTNKGRVYRAKAYELPDAGR
DARGQHVANLLAFQPDEKIAQILAIRDYEAVPYLILATKGGLVKKTALKDYDSPRSGGVI
AINLREMPEGGDDELIGAELVSAEDDLLLISKKAQSIRFTATDDALRPMGRATSGVKGMS
FREGDELLSMNVVRPGTFVFTATDGGYAKRTPVDEYRVQGRGGLGIKAAKIVEDRGSLVG
ALVVEETDEILAITLGGGVIRTRVNEVRETGRDTMGVQLINLGKRDAVVGIARNAEAGRE
AEEVDGADDVDGEPSEAHAEGVAEGTVEGTEPSTGEHEE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgagaacacccctgtgacacctgaacccgtgacgtccgaggaagagaccgtc
cccggtgtgggcatgcgtgtcgagcccgtcgggctcgagacggagatgcagcgctcctac
ctcgactacgcgatgtccgtcatcgtctcgcgtgcgctgcccgacgtacgggacggcctc
aagcccgtccaccgccgggtgctgtacgcgatgtacgacggcggctaccgccccgagaag
gggttctacaagtgcgcccgcgtcgtcggtgacgtcatgggtacgtaccacccgcacggc
gactcctccatctacgacgccctcgtgcgcctcgcacagccgtggtcgctgcggatgccg
ctggtggactccaacggcaacttcggttccccgggcaacgacccggccgccgccatgcgg
tacaccgagtgcaagatgatgccgctgtccatggagatggtccgggacatcgacgaggag
accgtcgacttccaggacaactacgacggccgcaaccaggagccgacggtcctgccggcg
cgcttcccgaacctgctggtcaacggctccgcggggatcgcggtcggcatggcgaccaac
atcccgccgcacaacctccgcgaggtcgcggccggcgcccagtggtacctggagcacccc
gaggcctcccacgaggagctgctggacgcgctgatcgagcgcatcaagggccccgacttc
ccgaccggcgcgctggtcgtgggccggaagggcatcgaggaggcgtaccgcaccggccgc
ggctccatcacgatgcgcgcggtggtcgcggtcgaggagatccagggccgccagtgcctg
gtcgtcacggagctgccgttccagaccaaccccgacaacctcgcgcagaagatcgccgac
ctggtcaaggacggcaaggtcggcggcatcgcggacgtccgcgacgagacctcctcgcgt
acggggcagcgcttggtcgtcgtcctcaagcgggacgcggtcgccaaggtcgtcctgaac
aacctgtacaagcacaccgacctccagacgaacttcggcgccaacatgctggccctggtc
gacggggtgccgcggacgctctccatcgacgcgttcatccgccactgggtgacgcaccag
atcgaggtcatcgtccggcgtacgcggttccggctgcgcaaggccgaggagcgggcgcac
atcctgcgcggcctcctcaaggccctgaacgccatcgacgaggtcatcgccctcatccgg
cgttccaacacggtggagatcgcgcgcgagggcctgatgggcctgctggagatcgacgag
ctccaggccaacgcgatcctggagatgcagctgcgccgactggccgcgctggagcaccag
aagatcaccgccgagcacgacgagctccaggcgaagatcaacgagtacaacgagatcctg
gcctcgcccgccaagcagcgcgccatcgtcagcgaggagctggcggcgatcgtcgacaag
ttcggcgacgaccggcgctcccagctggtgcccttcgacggtgacatgtccatcgaggac
ctgatcgccgaggaggacatcgtcgtcacgatctcccgcagcggctatgtgaagcgcacg
aagacggacgactaccgctcgcagaagcgcggcggcaagggcgtgcgcggcacgaagctg
cgggaagacgacatcgtcgaccacttcttcgtctcgaccacgcaccactggctgctgttc
ttcacgaacaagggccgggtctaccgcgccaaggcgtacgagctcccggacgccggccgg
gacgcgcgcggccagcacgtcgccaacctgctggccttccagccggacgagaagatcgcc
cagatcctggcgatccgcgactacgaggccgtgccgtacctgatcctggcgacgaagggc
ggtctggtgaagaagaccgcgctcaaggactacgactcgccccgctccggcggcgtcatc
gcgatcaacctccgcgagatgccggaaggcggcgacgacgagctgatcggcgccgagctg
gtgtcggccgaggacgatctgctgctcatcagcaagaaggcccagtcgatccggttcacc
gcgacggacgacgcgctgcgcccgatgggccgtgccacctcgggtgtgaaggggatgagt
ttccgcgagggcgacgaactcctctcgatgaatgtcgtccggcccggtacgttcgtcttc
accgctaccgacggcgggtacgcgaagcggacccccgtcgacgagtaccgcgtccagggt
cgcggcggcctcggcatcaaggccgccaagatcgtggaggaccgcggatcgctcgtcggt
gcgctggtggtcgaggagaccgacgagattctcgccatcacgctcggcggtggtgtgatt
cgtacgcgagtcaatgaagtcagggagacgggccgtgacaccatgggcgtccaactgatc
aatctgggcaagcgcgacgccgtcgtcggcatcgcgcgcaacgccgaggccggtcgtgag
gcggaagaggtcgatggggccgatgacgtcgacggcgagccgtccgaggcccacgccgag
ggcgtggcagagggcactgtcgagggcacggagccttcgaccggggagcacgaggagtag
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