Streptomyces sp. CMC78: SCMC78_37480
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Entry
SCMC78_37480 CDS
T11197
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCMC78_37480 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stcm01007
]
SCMC78_37480 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stcm03016
]
SCMC78_37480 (aspS)
03029 Mitochondrial biogenesis [BR:
stcm03029
]
SCMC78_37480 (aspS)
Enzymes [BR:
stcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SCMC78_37480 (aspS)
Amino acid related enzymes [BR:
stcm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SCMC78_37480 (aspS)
Transfer RNA biogenesis [BR:
stcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SCMC78_37480 (aspS)
Prokaryotic type
Other AARSs
SCMC78_37480 (aspS)
Mitochondrial biogenesis [BR:
stcm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SCMC78_37480 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BFP53941
UniProt:
A0AB33KH53
LinkDB
All DBs
Position
4140757..4142550
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AA seq
597 aa
AA seq
DB search
MHRYRSHTCGELRASDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGLVQLVARPGTPGNE
ALAKLTKETVVRIDGKVSARGADNVNPELPTGEIEIEVTEVEVLGEAGPLPFTINTEDGV
NEERRLEYRFLDLRRERMHRNIMLRSAVIASIRSKMVALGFNEMATPILTATSPEGARDF
VVPSRLNPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVEQEDVFQPIEKLMTELFTEFGNGREVTSPFPRIPFRESMLKYGNDKPDLRAKLELV
DISDVFADSGFKAFAGKHVRALPVPDTAGQSRKFFDGLGEYAVEHGAKGLAWVRVGEDGT
LAGPIAKFLTETDVKTLTERLSLVPGHAVFFGAGEFDEVSKIMSAVRVEAAKRAGHFEEG
VFRFCWIVDFPMYEKDEETGKIDFSHNPFSMPQGGLADLEEKDPLDILAWQYDIVCNGIE
LSSGAIRNHEPELMLKAFEIAGYDRETVEHEFAGMLRAFRLGAPPHGGIAPGVDRIVMLL
ADEPNIRETIAFPLNGNAQDLMMGAPTVLDETRLRELNIQLRKPVAAKGASEKLAAE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtacaggtcccacacctgcggcgagctccgcgcctctgacgtcggtaccgac
gtccggctgagcggctggctgcacaatcgccgagacctgggtggcatcctcttcatcgat
ctgcgcgaccactacggtctggtgcagctcgtcgcccgccccggcacgcccggcaacgag
gccctggcgaagctcaccaaggagaccgtcgtccggatcgacggcaaggtgtccgcgcgc
ggtgccgacaacgtcaacccggagctgccgaccggtgagatcgagatcgaggtcaccgag
gtcgaggtgctcggcgaggccggcccgctgccgttcacgatcaacaccgaggacggcgtc
aacgaggagcggcgcctggagtaccgcttcctcgacctgcgccgcgagcgcatgcaccgc
aacatcatgctgcgctcggccgtgatcgcctccatccgctccaagatggtggccctcggc
ttcaacgagatggcgaccccgatcctcaccgcgacctcccccgagggcgcccgtgacttc
gtcgtcccgtcccgcctgaaccccggcaagttctacgcgctgccgcaggccccgcagcag
ttcaagcagctgctgatgatctcgggcttcgaccgctacttccagatcgcgccgtgcttc
cgcgacgaggacgcccgcgcggaccgttcgccgggcgagttctaccagctcgacgtcgag
atgtccttcgtcgagcaggaggacgtcttccagccgatcgagaagctgatgaccgagctc
ttcaccgagttcggcaacggccgtgaggtcacctcgccgttcccgcgcatcccgttccgc
gagtcgatgctgaagtacggcaacgacaagccggacctgcgcgccaagctggagctcgtc
gacatctcggacgtcttcgccgactccgggttcaaggcgttcgccggcaagcacgtacgc
gcgctgccggtcccggacaccgcgggccagtcccggaagttcttcgacggcctcggtgag
tacgccgtcgagcacggcgccaagggcctggcctgggtgcgggtgggcgaggacggcacg
ctggccggtccgatcgccaagttcctcaccgagaccgacgtcaagacgctcaccgagcgg
ctctcgctggtcccgggccacgcggtcttcttcggtgcgggcgagttcgacgaggtctcc
aagatcatgtcggccgtccgggtcgaggccgccaagcgcgccggtcacttcgaggagggc
gtcttccggttctgctggatcgtcgacttcccgatgtacgagaaggacgaggagaccggc
aagatcgacttctcgcacaaccccttctccatgccccagggcggtctggccgacctggag
gagaaggacccgctggacatcctcgcctggcagtacgacatcgtctgcaacggcatcgag
ctgtcctcgggcgccatccgtaaccacgagcccgagctgatgctcaaggccttcgagatc
gccgggtacgaccgcgagaccgtcgagcacgagttcgcgggcatgctccgcgcgttccgt
ctcggcgccccgccgcacggtggcatcgccccgggcgtcgaccgcatcgtgatgctgctc
gccgacgagccgaacatccgcgagacgatcgccttcccgctcaacggcaacgcccaggac
ctgatgatgggcgccccgaccgtgctggacgagacgcggctgcgcgagctgaacatccag
ctgcgcaagccggtcgccgcgaagggcgcgtcggagaagctcgccgcggagtag
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