Streptomyces sp. CMC78: SCMC78_38270
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Entry
SCMC78_38270 CDS
T11197
Name
(GenBank) response regulator transcription factor
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCMC78_38270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
stcm02022
]
SCMC78_38270
Two-component system [BR:
stcm02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
SCMC78_38270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_40
HTH_IclR
HTH_28
HTH_Tnp_ISL3
HTH_24
DUF742
HTH_7
HTH_AsnC-type
HTH_29
YAcAr
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
BFP54020
UniProt:
A0AB33KHW3
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Position
complement(4242835..4243455)
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AA seq
206 aa
AA seq
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MTTAQPLRVLLADDEHLIRGALAALLALEEDLVVVAEAASGPEALAMALAHRPDVAVLDL
QMPGADGVKVATSLRAELPGCRTMIVTSHGRPGHLKRALAAGVRGFVPKTVSARRLAEII
RTVHAGNRYVDPELAADAISAGDSPLTAREAEVLELAADGAPVAEIAERASLSQGTVRNY
LSSAATKIGAENRHTAVRLARERGWV
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgcgcagcccctgcgggtcctgctggccgacgacgagcacctgatccggggt
gcgctggccgcgctgctcgccctggaggaggacctcgtggtggtcgcggaggcggcgagc
ggtcccgaggcgctggcgatggcgctcgcgcaccggcccgatgtcgccgtcctggatctc
cagatgccgggtgcggacggtgtgaaggtcgccacatcgctgcgggccgaactgcccggc
tgccgcaccatgatcgtgaccagccacggccgccccgggcacctcaagcgggcgctggcc
gccggtgtacgggggttcgtcccgaagaccgtcagcgcccggcggctcgccgagatcatc
cgtaccgtccacgccggaaaccgttacgtggatccggagttggcggccgacgccatctcc
gccggggactccccgctgaccgccagggaggccgaggtgctcgaactggcggcggacggg
gcgccggtcgcggagatcgcggaacgggcctcgctgtcccaggggaccgtacgcaactac
ctgtcgtcggccgccaccaagatcggtgcggagaaccggcacacggcagtgcgtctcgcc
cgcgagcggggttgggtatag
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