Streptomyces sp. CMC78: SCMC78_40040
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Entry
SCMC78_40040 CDS
T11197
Name
(GenBank) hypothetical protein
KO
K03710
GntR family transcriptional regulator
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stcm03000
]
SCMC78_40040
Transcription factors [BR:
stcm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SCMC78_40040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
HVO_A0261_N
HTH_DeoR
HTH_Crp_2
TrmB
DUF5817_CT
Rrf2
HTH_41
Sca2
RP-C
WHD_MCM_arc
DUF7342
Motif
Other DBs
NCBI-ProteinID:
BFP54197
UniProt:
A0AB33KHP9
LinkDB
All DBs
Position
complement(4431927..4432703)
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AA seq
258 aa
AA seq
DB search
MTRLGRNPMYQQIADALREQITSGKLEPDAKLPTEAELRDQYGVSRETVRKSLAQLVNEG
LVVSARPQGHFVRRRRPMVFRPQAEFRKRPYSPEMDAFTTEYAAEGREPRQEIEVTIVEP
PEEVAKRLRLEPGELVAVRKRVRYLDGEPFNINDSYFPLALVRDSEIMRPEDIARGANQV
LAELGYRQERALDELYVRMPTPEQVHRLDLGPGTPVGIHVVTGHTAEGKPVRVAVTVLPG
DRHVISYERQREDPNEDA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgactcgtctcgggcggaacccgatgtatcagcagatcgcggacgcgctgcgggagcag
atcacgtccgggaagctcgaaccagatgcgaagctcccgactgaagcagagctgcgcgat
cagtacggcgtgtcacgagagaccgtgcgcaagtcgctcgcccagctcgtgaacgagggg
ctcgtcgtctcggcgcgtccgcagggccacttcgtccgtcggcgtcggccgatggtgttc
cgccctcaagcggagttccggaagcggccgtattcgccggagatggacgccttcacgacc
gagtacgcggctgagggacgcgagccacggcaggagatcgaggtgaccatcgtggagcca
ccggaggaagtcgccaagaggctccggctggaaccgggcgagctggtcgcggtgcggaag
cgagtgcgctacctcgacggggagccgttcaacatcaacgacagttacttcccgctcgcc
cttgtacgggattcggagatcatgcgcccggaggacatcgctcgcggcgccaaccaagtt
ctggccgaactcgggtacaggcaggagcgagccctagacgagttgtacgtccggatgccc
acccctgagcaggtgcatcgacttgacctgggccccggaacgccggtcgggatccatgtt
gtcaccggccacacagccgaggggaagcctgtgagagtggcggtgactgtgctccctggc
gacaggcacgtgatctcgtacgagcgacagcgcgaagatccgaacgaggacgcatga
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