Streptomyces sp. CMC78: SCMC78_42000 Help Entry SCMC78_42000      CDS       T11197                                  Name (GenBank) RtcB family protein   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism stcm  Streptomyces sp. CMC78 Brite KEGG Orthology (KO) [BR:stcm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:stcm03016]     SCMC78_42000 Enzymes [BR:stcm01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      SCMC78_42000 Transfer RNA biogenesis [BR:stcm03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     SCMC78_42000  Prokaryotic type    tRNA splicing ligases     SCMC78_42000 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-ProteinID:  BFP54393 UniProt:  A0AB33KRE4 LinkDB All DBs Position 4644287..4645402 Genome browser AA seq 371 aa AA seqDB search MQQLRNVSTLPWIKGLAVMPDVHFGKGATVGSVIAMQGAVCPAAVGVDIGCGMSAVRTSL TANDLPGDLSRLRSKIEQAIPVGRGMHDAVVDPGKLHGFPTAGWDDFWGRFGGIADAVKF RQERATKQMGTLGSGNHFIEFCLDETGSVWLMLHSGSRNIGKELADFHIGQAQKLPHNQG LIDRDLAVFVADTPQMAAYRNDLFWAQEYAKFNRAIMMGLFQDVVRKEFKKARVTFDPVI SCHHNYVAEERYEGMDLLVTRKGAIRAGSGDYGIIPGSMGTGSYIVKGLGNEKSFNSASH GAGRRMSRNAAKKRFSTKDLEEQTQGVECRKDSGVVDEIPGAYKPIEQVIDQQRDLVAVV AKLKQVVCVKG NT seq 1116 nt NT seq  +upstreamnt  +downstreamnt atgcagcagctgcgcaacgtctcgacgctgccgtggatcaagggtctggccgtcatgccg gacgtccacttcggcaagggggcgacggtcgggtcggtgatcgcgatgcagggcgcggtg tgcccggcggcggtcggggtggacatcggctgcgggatgtccgccgtcaggacgtccctc accgcgaacgatcttcccggcgacctgtcacggctgcgctccaagatcgagcaggcgatt ccggtcggccggggcatgcacgacgccgtggtggacccggggaagctgcacgggttcccg acggcgggatgggacgacttctgggggcggttcggggggatcgccgatgcggtcaaattc cgtcaggaacgtgccacgaagcagatgggaacgctcggatcaggtaatcatttcatcgag ttctgtctcgatgagaccggttctgtctggttgatgctgcattccggttcgcggaacatc ggcaaggaactggccgacttccacatcggccaggcgcagaagctgccgcacaaccagggg ctgatcgaccgcgacctggcggtgttcgtcgcggacaccccgcagatggccgcgtaccgc aacgacctcttctgggcgcaggagtacgcgaagttcaaccgggcgatcatgatggggctc ttccaggacgtggtccgcaaggagttcaagaaggcccgggtgaccttcgatccggtcatc tcctgccaccacaactacgtggcggaggagcggtacgagggcatggacctgctggtcacc cgtaagggcgcgatccgggcggggtccggcgactacgggatcatcccgggatccatgggc accggttcgtacatcgtgaagggcctcggcaacgagaagtcgttcaactcggcgtcgcac ggcgcgggccggcggatgagccggaacgcggcgaagaagcgcttctcgaccaaggacctg gaggagcagacgcagggcgtggagtgccgtaaggactccggtgtcgtggacgagatcccg ggtgcgtacaagccgatcgagcaggtcatcgatcagcagcgggatctggtcgcggtcgtc gcgaagctcaagcaggtggtgtgcgtgaagggctga

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