Streptomyces sp. CMC78: SCMC78_51700
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Entry
SCMC78_51700 CDS
T11197
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm03030
DNA replication
stcm03430
Mismatch repair
stcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCMC78_51700 (holA)
03430 Mismatch repair
SCMC78_51700 (holA)
03440 Homologous recombination
SCMC78_51700 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stcm03032
]
SCMC78_51700 (holA)
03400 DNA repair and recombination proteins [BR:
stcm03400
]
SCMC78_51700 (holA)
Enzymes [BR:
stcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCMC78_51700 (holA)
DNA replication proteins [BR:
stcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCMC78_51700 (holA)
DNA repair and recombination proteins [BR:
stcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCMC78_51700 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
QatB
Motif
Other DBs
NCBI-ProteinID:
BFP55363
UniProt:
A0AB33KJQ9
LinkDB
All DBs
Position
5751560..5752606
Genome browser
AA seq
348 aa
AA seq
DB search
MPWATWAVLGCQWGVGCWIAMATRKNSTDDPLAPVTLAVGQEDLLLDRAVQQVVAAARAA
DADTDVRDLTPDQLQPGTLAELTSPSLFAERKVVIVRNAQDLSADTVKDVKAYLGAPVEE
ITLVLLHAGGAKGKGLLDAARKAGAREVACPKTTKPAERLSFVRSEFRTHGRSATPEACQ
ALVDSIGSDLRELASAVSQLIADVEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEA
LEALRWSLSTGVAPVLITSALAQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQM
RGWTPDGVAVALRAVAAADAGVKGGGDDPEYALEKAVVVVARAARAGR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgccctgggccacctgggccgtcctcggctgtcagtggggcgtgggatgctggatcgcg
atggccaccaggaagaactccaccgacgatccgctcgcccccgtcaccctcgccgtgggc
caggaggacctcctcctggaccgtgcggtgcaacaggtggtggcggccgcgcgtgctgcc
gacgccgacacggatgtacgtgatctgacgcccgaccagttgcagcccggcacgctcgcc
gagctcaccagcccctcgctcttcgccgagcgcaaggtcgtgatcgtgcgcaacgcgcag
gatctctcggccgacacggtcaaggacgtcaaggcgtatctcggcgcgccggtcgaggag
atcacactcgtcctgctgcacgcgggcggagccaagggcaaggggctgctggacgcggcg
cgcaaggccggggcgcgggaggtcgcctgcccgaagaccaccaagccggccgagcggctc
tccttcgtacggtcggagttccggacccacgggcgttccgcgacgccggaggcctgccag
gcgctggtcgactccatcggcagcgatctgcgggagctggccagtgcggtgtcgcagctg
atcgcggacgtcgagggcacgatcgacgaggcggtcgtcgggcgctattacacggggcgg
gccgaggcgtcctcgttcaccgtggccgaccgggccgtcgaggggcgggcggcggaggcg
ctggaggcgctgcggtggtcgttgtcgaccggggtcgcgccggtcctgatcaccagtgcg
ctggcgcagggggtgcgggcgatcgggaagctgtcctccgcgcggggtgggcggccggct
gatctcgcccgggagctggggatgccgccgtggaagatcgaccgggtgcggcagcagatg
cgggggtggacgccggacggggtcgcggtggccctgcgggccgtggctgcggcggatgcg
ggggtgaagggcgggggggacgatcctgagtacgccctggagaaggctgtcgtcgttgtt
gcgcgggccgcgcgggctgggcggtag
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