Streptomyces sp. CMC78: SCMC78_51910
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Entry
SCMC78_51910 CDS
T11197
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stcm03016
]
SCMC78_51910
Enzymes [BR:
stcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SCMC78_51910
Transfer RNA biogenesis [BR:
stcm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SCMC78_51910
Prokaryotic type
SCMC78_51910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_3
Lactamase_B_4
BREX_PglY_5th
Motif
Other DBs
NCBI-ProteinID:
BFP55384
UniProt:
A0AB33KIP1
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All DBs
Position
5779332..5780246
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AA seq
304 aa
AA seq
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MSVRELVVLGTASQVPTRHRNHNGYLLRWDGEGILFDPGEGTQRQMLRAGVAAHDIDRIC
ITHFHGDHSLGLAGVIQRINLDQVPHPVTAHYPASGQHFFDRLRYATAYRETVELTRAPV
AGAGGVLATTSAYTLDSMKLSHPVESYGYRLTEPDTRRMLPALLKEHGIAGPDVGRLQRE
GALGGVTLEQVSELRRGQRFAFVMDTRLCDGVYALAEGCDMLVIESTFLDEDEKLAVDHG
HLTAGQAGRVAKEAGVRHLVLTHFSQRYHDPERFETQARAAGFDGELTVAQDLIRVPLPT
RHHP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtacgcgagttggtggtgctcggcaccgccagccaggtccccacccggcaccgc
aaccacaacggctatctgctgcgctgggacggcgagggcatcctcttcgaccccggcgag
ggcacccagcgccagatgctgagggccggggtcgccgcgcacgacatcgaccggatctgc
atcacccacttccacggcgaccactccctcgggctcgccggggtgatccagcggatcaac
ctcgaccaggtgccgcacccggtgaccgcgcactatccggcgagcgggcagcacttcttc
gaccggctgcggtacgccacggcctaccgcgagaccgtcgagctgacccgggccccggtc
gccggagccggcggcgttctcgccaccacctccgcgtacaccctggacagcatgaagctc
tcgcaccccgtcgagtcgtacggctaccgcctcaccgagcccgacacccggcgcatgctg
cccgccctcctcaaggagcacggcatcgccggaccggacgtcggccgcctccagcgcgaa
ggcgcgctcggcggcgtcaccctggagcaggtctccgaactccggcgcggacagcggttc
gcgttcgtcatggacacccggctctgcgacggggtgtacgcgctggccgagggctgcgac
atgctcgtcatcgagtcgaccttcctcgacgaggacgagaagctggccgtcgaccacggg
cacctgaccgccggacaggccggccgggtggcgaaggaggcgggcgtgcgccacctcgtg
ctgacccacttctcccagcgctaccacgacccggaacgcttcgagacccaggcccgcgcc
gccgggttcgacggcgaactcaccgtcgcccaggacctgatccgcgtccccctgcccacc
cggcaccacccctga
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