Streptomyces sp. CMC78: SCMC78_52500
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Entry
SCMC78_52500 CDS
T11197
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCMC78_52500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stcm02000
]
SCMC78_52500
Transporters [BR:
stcm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SCMC78_52500
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
Rad17
OB_MalK
AAA_22
SMC_N
ABC_ATPase
AAA
AAA_30
ORC-CDC6-like
SRP54
AAA_28
TOBE
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
BFP55443
UniProt:
A0AB33KUC4
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Position
5831182..5832345
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AA seq
387 aa
AA seq
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MSALPVPSTAARRPDPARAASAADGRAATGARVEFRSLRRAFGPTVALDGLDLTAEPGEL
LALLGPSGCGKTTALRVLAGFEQPDSGEVLVDGEDITRVPANRRDAGMVFQSYSLFPHLN
ARDNVAFGLRVRKVSAAERHATAAELLGLVGLPDHGGRFPHQMSGGQQQRVALARALALR
PRVLLLDEPLSALDAKVRLSLREEIRRLQLSLGITTIFVTHDQEEALSMADRVAVLNAGR
LEQCAPPAELYERPATAFVAEFVGTMNRLPGRLTGTGSVEVAGATLPVDGEAPAGGGPVD
VLIRPEGIRADADPEGTATVVSASFLGSVTRVLLDLRGGVALKADLSSRDAADLLPGVRA
RVTPVPRPVLVVPATPVTDERTGKASV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccctgcccgtcccgtccaccgccgcccgacggcccgatccggcgcgggccgcc
tcggccgccgacgggcgcgccgccaccggagcccgggtggagttccgctcgctgcgccgg
gcgttcggcccgaccgtggccctcgacggactcgacctcaccgccgaacccggcgaactg
ctcgccctcctcggcccctccggctgcggcaagaccaccgcgctgcgggtgctcgccggc
ttcgagcagccggactccggtgaggtgctggtcgacggcgaggacatcacccgcgtcccc
gccaaccggcgcgacgccgggatggtcttccagtcctacagcctcttcccgcatctgaac
gcccgcgacaacgtggccttcggcctgcgggtacggaaggtgtccgccgccgagcggcac
gccaccgccgccgaactcctcggcctggtcgggctgcccgaccacggcggacgcttcccg
caccagatgtccggcggccagcagcagcgcgtggccctggcccgcgcgctcgccctgcgg
ccccgggtgctgctgctggacgaaccgctctcggcactcgatgccaaggtgcggctctcg
ctccgcgaggagatccgccgcctccagctgtcgctcggcatcaccaccatcttcgtcacc
cacgaccaggaggaggccctctccatggccgaccgggtcgccgtcctcaacgcgggccgc
ctggaacagtgcgcgcccccggccgagctgtacgagcgccccgccaccgcgttcgtcgcg
gagttcgtcggcaccatgaaccggctgccgggccggctgaccgggaccggatcggtcgag
gtcgcgggcgccaccctgccggtcgacggcgaggccccggcgggcggcggccccgtcgac
gtgctgatccgccccgagggcatccgcgccgacgccgaccccgagggcacggccaccgtc
gtctccgcgtcgttcctcggctcggtcacccgggtcctgctcgacctcaggggcggcgtc
gcgctcaaggccgacctgtcctcccgcgacgccgccgacctgctgcccggcgtacgggcc
cgggtcacgcccgtaccgcgtccggtcctcgtcgtccccgccactcccgtaacggatgag
cgcaccgggaaggcgtcggtatga
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