Streptomyces sp. CMC78: SCMC78_58000
Help
Entry
SCMC78_58000 CDS
T11197
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SCMC78_58000 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
stcm03011
]
SCMC78_58000 (rpsA)
Ribosome [BR:
stcm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SCMC78_58000 (rpsA)
Bacteria
SCMC78_58000 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
SOGA1-2-like_CC
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BFP55993
UniProt:
A0AB33KLI3
LinkDB
All DBs
Position
6445627..6447144
Genome browser
AA seq
505 aa
AA seq
DB search
MTSSTETTATTPQVAVNDIGDADAFLAAIDETIKYFNDGDIVDGVIVKVDRDEVLLDIGY
KTEGVIPSRELSIKHDVDPNEVVKVGDEIEALVLQKEDKEGRLILSKKRAQYERAWGTIE
KIKEEDGIVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKELEAKIIELD
KNRNNVVLSRRAWLEQTQSEVRQTFLTTLQKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV
SELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWQQFARTHQIGQVV
PGKVTKLVPFGAFVRVDEGIEGLVHISELAERHVEIPEQVVQVNDEIFVKVIDIDLERRR
ISLSLKQANESFGGDPASVEFDPTLYGMAASYDDQGNYIYPEGFDPETNDWLEGFEAQRE
VWETQYAEAQQRFEQHQAQVIKSREADEAAAAEGAAAPAGAAPAASGGSGGGGGSYSSES
ADNSGALASDEALAALREKLAGGQS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagcaccgagaccaccgccaccactccgcaggttgcggtcaacgacatcggc
gacgcggacgcgttcctcgcggcgatcgacgagacgatcaagtacttcaacgacggcgac
atcgttgatggtgtcatcgtcaaggttgaccgggacgaggttctcctcgacatcggttac
aagaccgaaggtgtcatcccgagccgcgagctctcgatcaagcacgacgtcgacccgaac
gaggtcgtcaaggtcggcgacgagatcgaggccctggttctccagaaggaggacaaggaa
ggccgcctgatcctctcgaagaagcgcgctcagtacgagcgtgcctggggcaccatcgag
aagatcaaggaagaggacggcatcgtcaccggtaccgtcatcgaggtcgtcaagggtggt
ctcatcctcgacatcggcctccgtggcttcctcccggcgtcgctcgtcgagatgcgtcgt
gtccgcgacctccagccctacgtgggcaaggagctcgaggccaagatcatcgagctggac
aagaaccgcaacaacgtggtcctgtcccgccgtgcctggctcgagcagacccagtccgag
gttcgccagacgttcctcaccaccctgcagaagggtcaggtccgctccggcgtcgtctcc
tcgatcgtcaacttcggtgccttcgtggacctgggtggcgtcgacggtctcgtgcacgtc
tccgagctgtcctggaagcacatcgaccacccctccgaggtcgtcgaggtcggtcaggaa
gtcaccgtcgaggtcctcgacgtcgacatggaccgcgagcgcgtctccctgtcgctcaag
gcgacgcaggaagacccgtggcagcagttcgcccggacgcaccagatcggtcaggtcgtc
ccgggtaaggtcaccaagctcgttcccttcggtgcgttcgtgcgcgtcgacgagggcatc
gagggtctggtccacatctccgagctggccgagcgccacgtggagatcccggagcaggtc
gtccaggtcaacgacgagatcttcgtcaaggtcatcgacatcgacctcgagcgccgccgc
atcagcctctcgctgaagcaggccaacgagtccttcggtggcgacccggcctcggtcgag
ttcgacccgacgctgtacggcatggccgcgtcgtacgacgaccagggcaactacatctac
cccgagggcttcgaccccgagaccaacgactggctcgagggcttcgaggcgcagcgcgag
gtctgggagacccagtacgccgaggcgcagcagcgcttcgagcagcaccaggcccaggtc
atcaagtcccgcgaggccgacgaggccgctgcggccgagggcgctgctgccccggccggc
gctgctccggccgcctccggcggcagcggtggcggcggcggttcgtactcctcggagtcg
gcggacaactccggcgccctggcgtcggacgaggcccttgccgcgctgcgcgagaagctc
gcgggcggccagagctga
DBGET
integrated database retrieval system
