Streptomyces sp. CMC78: SCMC78_59390
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Entry
SCMC78_59390 CDS
T11197
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
stcm Streptomyces sp. CMC78
Pathway
stcm03030
DNA replication
stcm03430
Mismatch repair
stcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCMC78_59390
03430 Mismatch repair
SCMC78_59390
03440 Homologous recombination
SCMC78_59390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stcm03032
]
SCMC78_59390
03400 DNA repair and recombination proteins [BR:
stcm03400
]
SCMC78_59390
Enzymes [BR:
stcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCMC78_59390
DNA replication proteins [BR:
stcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCMC78_59390
DNA repair and recombination proteins [BR:
stcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCMC78_59390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BFP56132
UniProt:
A0AB33KNG5
LinkDB
All DBs
Position
complement(6590489..6591493)
Genome browser
AA seq
334 aa
AA seq
DB search
MLDDRQTAAPWPTAYPQGYAVVDVETTGLARDDRIISAAVYRLDALGNVEDHWYTLVNPE
RDPGPVWIHGLTSDVLEGAPLFPEVAEELSARLADRVLVAHNAAFDWSMIAREYARASVI
APVEHRLCTIALAKELRLPLPNHKLATLAAHFGVVQQQAHHALDDARVLAEAFRPSLHAA
ARGGVRLPLLECRPLTEWSDSPVAPRVGYQPSRQNSWRPSRKRPACPYPNPGRYEKEKPL
QQGMRVAFSGDTSIDRELLEDRAMEAGLHVATSVSRLTSLLVTNDPDAATSKTQKARSFG
TPILEESAFTHLLRDVAPADGAVLPQQAPPPSSE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgaccgccagacagccgcaccgtggccgaccgcctacccccaggggtacgcg
gtcgtcgacgtggagaccaccggcctcgcccgcgacgaccggatcatctccgccgccgtc
taccggctggacgccctgggcaatgtcgaggaccactggtacacgctggtcaacccggag
cgggaccccggtcccgtctggatccacgggctgacgagtgacgtgctcgaaggggcgccg
ctctttcccgaggtggccgaggagttgtccgcgcggctcgcggaccgggtgctcgtggcg
cacaacgcggcgttcgactggtcgatgatcgcccgggagtacgcacgggcctcggtgatc
gccccggtcgagcaccggctgtgcaccatcgcgctcgccaaggagctgcggctgccgctg
cccaaccacaagctggccaccctcgccgcgcacttcggggtcgtccagcagcaggcccac
cacgccctggacgacgcccgggtgctggccgaggcgttccggccgagtctgcacgcggcg
gcccggggcggggtgcggctgccgttgctggagtgccgtccgctgaccgagtggtcggac
tcccccgtcgccccgcgcgtcgggtatcagccctcgcggcagaacagctggcggccctcg
cgcaagcggccggcctgcccgtatcccaatccggggcggtacgagaaggagaagccgctc
cagcaggggatgcgggtggccttctccggggacacctcgatcgaccgggagctgctggag
gaccgggcgatggaggccgggctccatgtggcgaccagcgtgtcgcggctgaccagtctg
ctggtgaccaacgacccggacgcggccacctccaagacgcagaaggccaggtcgttcggc
acgccgatcctggaggagagcgccttcacccatctgctgcgcgatgtggcccccgcggac
ggggccgtcctgccgcagcaggcgccaccgccgtcatcggagtga
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