Streptomyces sp. CMC78: SCMC78_61810
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Entry
SCMC78_61810 CDS
T11197
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stcm03400
]
SCMC78_61810
Enzymes [BR:
stcm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SCMC78_61810
DNA repair and recombination proteins [BR:
stcm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SCMC78_61810
Prokaryotic type
SCMC78_61810
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BFP56374
UniProt:
A0AB33KLK6
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All DBs
Position
complement(6849316..6850683)
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AA seq
455 aa
AA seq
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MSVAVVLFTSDLRLHDNPVLRAALREADEVVPLFVRDDAVHRTGFDAPNRLAFLADCLAD
LDAGLRHRGGRLVVRRGESAREVKRVAEEAGAASVHIAAGVSGYAAGREERIREALAGTG
RELRIHDAVVTALAPGRVVPTGGKDHFAVFTPYFRRWEAEGVRGTLTAPRTVRVPDGVTG
DPLPERDTVKNLSPGLARGGEEAGRKLVTSWLHGPMAEYEDGHDDLAGDATSRLSPHLHF
GTVSAAELVHRAQEKGGPGGEAFVRQLAWRDFHHQVLAARPDASWSDYRPRHDRWRADED
EIDAWKSGRTGYPLVDAAMRQLAHEGWMHNRGRMLAASFLTKTLYVDWRVGARHFLDLLV
DGDVANNQLNWQWVAGTGTDTRPNRVLNPVIQGKRFDPRGDYVRRWVPELAELEGAAIHE
PWKLEGLDRAGVDYPEPVVDLAEARARFERARGLD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgcggtggtgctgttcacctccgatctgcgtctgcacgacaacccggtgctg
cgggccgccctgcgcgaagcggacgaggtcgtcccgctgttcgtgcgggacgacgccgtc
caccgcaccgggttcgacgcgcccaaccggctggcgttcctcgccgactgcctggcggac
ctggacgccggactccgccaccggggcggccggctggtcgtccgccggggcgagtcggcc
cgcgaggtgaaacgggtggccgaggaggccggggcggcctccgtgcacatcgccgccggg
gtcagcgggtacgcggcagggcgcgaggagcggatccgggaggccctggcgggcaccggc
cgcgagctgcgcatccatgacgcggtggtcaccgcgctcgctccgggccgggtggtcccg
acgggcggcaaggaccacttcgcggtgttcaccccgtacttccgccgttgggaggcggag
ggagtacggggcacactgaccgctccgcgtacggtccgggtgccggacggcgtgacgggc
gacccgctcccggagcgcgacaccgtcaagaacctctcccccggtctggcccggggcggc
gaggaagcgggccgcaagctggtgacgtcctggctgcacggtccgatggccgagtacgag
gacggccatgacgatctggccggcgacgcgacgtcccgcctctcccctcatctgcatttc
ggtacggtctccgccgccgaactggtccaccgcgcgcaggagaagggcgggcccggcggc
gaggcgttcgtccggcagctggcctggcgcgacttccaccaccaggtcctcgcggcccgc
ccggacgcctcctggtccgactaccggccgcgccacgaccgctggcgcgccgacgaggac
gagatcgacgcctggaagtccgggcgtacgggctatccgctggtggacgcggcgatgcgg
cagctcgcgcacgagggctggatgcacaaccggggccggatgctggccgcgagcttcctc
accaagacgctgtacgtggactggcgggtgggcgcccggcacttcctggacctgctggtg
gacggcgatgtggcgaacaaccagctcaactggcagtgggtggcgggcaccggcacggac
acccggcccaaccgggtgctcaacccggtgatccagggcaaacgcttcgatccgcgcggc
gactacgtacgccgctgggtgccggagctggcggagctggagggggccgcgatccacgaa
ccctggaagctggagggcctggaccgggcgggcgtcgactatcccgaaccggtggtggac
ctggccgaggcacgggcccgcttcgaacgcgcgcgcggcctggactga
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