Streptomyces sp. CMC78: SCMC78_68840
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Entry
SCMC78_68840 CDS
T11197
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stcm03021
]
SCMC78_68840
Transcription machinery [BR:
stcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCMC78_68840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_3
DUF7343
HTH_24
DUF134
Phage_antitermQ
HTH_10
MarR
Motif
Other DBs
NCBI-ProteinID:
BFP57077
UniProt:
A0AB33KR96
LinkDB
All DBs
Position
complement(7642473..7643270)
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AA seq
265 aa
AA seq
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MQQTAPAAEPCADTEATSADQAFRRLRTLPPGPERDALRSETIREWLPMAHRIASRFRNR
GEPMDDLRQVAAVGLVKAVDRFDPLRGKAFETYAVPTVTGELKRHFRDHTWGVHVPRRVQ
DLRNRVRAARRDLAQQLEGRAPTCAEIASATGLGEDEVLLGMEAMESYSALSLDAEPAGG
EGGTPLVDRLGSCDPALDVAVDREAVKPELRRLPERERTILYLRYFRDMTQVSIAERLGI
SQMHVSRLLSQSCERLREGVLQETE
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaccgcacccgccgccgagccctgtgcggacacggaagcgacgtcggccgac
caggccttccggaggctgcggaccctgcctccggggccggagcgggatgccctgcggagc
gagacgatccgcgagtggctgccgatggcccatcggatcgcctcacggttccgcaaccgg
ggcgagcccatggacgatctgcgccaggtggcagccgtgggtctggtcaaggcggtggac
cgcttcgacccgctgcggggaaaggccttcgagacctacgccgttcccacggtcaccggg
gagctcaagcgccatttccgcgaccacacctggggcgtccacgtaccgcgacgtgtccag
gaccttcgcaaccgggtgcgcgcagcgcgacgcgatctcgcgcagcagttggagggcagg
gccccgacctgcgccgagatcgcctccgcgaccgggctcggcgaggacgaggtgctgctg
ggcatggaggccatggagagctacagcgccctctccctggacgccgaacccgcgggcggt
gagggcggcacgcccctggtcgatcggctgggatcctgcgaccccgccctggatgtcgcc
gtcgaccgcgaggccgtcaagcctgagctgcgcaggctgccggagcgggagcggacgatt
ctgtatctccgctacttccgggacatgacccaggtgagcatcgccgagcgcctcggcatc
tcacagatgcacgtttcccggctgctcagccagtcctgcgagcggttgcgtgagggcgtg
ctccaggagaccgaatga
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