Streptomyces sp. CMC78: SCMC78_71000
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Entry
SCMC78_71000 CDS
T11197
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
stcm Streptomyces sp. CMC78
Brite
KEGG Orthology (KO) [BR:
stcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stcm03021
]
SCMC78_71000
Transcription machinery [BR:
stcm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCMC78_71000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
DUF7343
HTH_23
MarR_2
PF0610-like_N
HTH_37
KORA
MarR
GerE
HTH_24
HTH_3
Motif
Other DBs
NCBI-ProteinID:
BFP57293
UniProt:
A0AB33KUL3
LinkDB
All DBs
Position
complement(7880878..7881759)
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AA seq
293 aa
AA seq
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MTVHSAQTARTAGTERAGAAEELPWIEDAGKIAPMDARRLSRLFFDRLQVLEEGTHEYQY
ARNTLIEMNLSLVRFAANRFRNRGSGDMEDIVQVGTIGLIKAIDRFDLSREVEFTSFAVP
YIVGEIKRFFRDTSWAVHVPRRLQELRVDLAKAKESLAGDLDRDPTVRELAQDLGIEESE
VTEGIVASNGYTAGSLDMPTDTAEAGPGQHSGRTFADVLGEPDPAMETVENLHALAPLLG
ELDERERRIIDMRFGQEMTQAQIGAELGISQMHVSRLLSRMLGKLRNGMLTQE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcacagcgcgcagaccgcgcggacggccggtacggagcgggcgggcgccgcc
gaggagcttccgtggatcgaggacgccgggaagatcgccccgatggacgcgcgccggctc
tctcgtctcttcttcgaccgtctccaggtcctggaggagggcacgcacgagtaccagtac
gcgcgcaacaccctcatcgagatgaacctgtccctcgtccgcttcgccgccaaccgcttc
cgcaaccggggcagcggcgacatggaggacatcgtccaggtcggcaccatcgggctgatc
aaggcgatcgaccgcttcgacctctcgcgggaggtcgagttcacgtcgttcgccgtgccg
tacatcgtcggggagatcaagcggttcttccgtgacacgagctgggcggtccatgtgccg
cgtcggctccaggaactgcgggtcgatctcgcgaaggcgaaggagtccctggcgggcgac
ctcgaccgggatcccacggtgcgggagctggcacaggacctggggatcgaggagtccgag
gtcacggagggaatcgtcgcctccaacggctatacggcgggctccctggacatgccgacc
gacaccgcggaggccgggcccggccagcactccgggcgcaccttcgccgatgtgctgggc
gaaccggacccggccatggagaccgtggagaacctccacgccctcgcgcccctgctgggc
gaactcgacgagcgggagcgccggatcatcgacatgcgcttcgggcaggagatgacccag
gcgcagataggcgcggagctcgggatctcgcagatgcatgtgtcccggctgctgagccgg
atgctgggcaagctgcggaacgggatgctcacccaggagtga
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