Streptomyces sp. CA-256286: JHY03_07140
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Entry
JHY03_07140 CDS
T11337
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
stcz Streptomyces sp. CA-256286
Pathway
stcz00523
Polyketide sugar unit biosynthesis
stcz01100
Metabolic pathways
stcz01110
Biosynthesis of secondary metabolites
stcz01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
stcz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JHY03_07140 (rfbH)
Enzymes [BR:
stcz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
JHY03_07140 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QTA30598
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Position
complement(850222..851541)
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AA seq
439 aa
AA seq
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MNDAKARILDQVRAYHGTGEDHHGTTAAEFVPGVTPLWPSGAVFDAEDRAALVEAALDLR
IAAGVSTRRFEREFAKVLGLRKAHLTNSGSSANLLALTAFTSPLLEDRRLLPGDEVITVA
AGFPTTVNPIIQNGLVPVFIDVELGTYNTTPERIEAAIGPRTKAIMIAHSLGNPFAAEDV
ARIADEHGLFLIEDNCDAVGSTYKGRPTGSFGDVATVSFYPAHHLAMGEGGCVLTDNLVL
ARIVESLRDWGRDCWCEPGEDNRCFKRFDYQLGDLPHGYDHKYVFSHVGYNLKATDLQAA
LGLSQLGKLPAFGAARRANWRRLREGLDTVPGLILPEATESSDPSWFGFCLTVRQDANYT
RKELVAFLEARKIGTRRFFAGNLTRHPAYIDVPRRIHGSLDNSDLIAEHTFWVGVFPGLT
AEMIDYIVDSVREFALKNS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgccaaggcccggatcctggaccaggtacgcgcctaccacggcaccggcgag
gatcaccacggcaccacggccgccgagttcgtgcccggagtcacccccctctggccgtcg
ggcgcggtgttcgacgccgaggaccgcgccgcgctggtggaggccgcgctggacctgcgg
atcgcggcgggggtcagcacccggcgcttcgagcgggagttcgcgaaggtcctgggactg
cgcaaggcccacctgaccaactcgggctcgtccgcgaacctgctcgcgctcaccgcgttc
acctcgcccctgctggaagaccgccgcctgctgcccggcgacgaggtgatcaccgtggcg
gcgggcttccccaccaccgtcaacccgatcatccagaacggtctcgtaccggtcttcatc
gacgtcgagctgggcacctacaacaccaccccggaacggatcgaggccgccatcgggccc
cggaccaaagcgatcatgattgcccactctctgggcaacccgttcgcggccgaggacgtc
gcccgcatcgcggacgagcacgggctgttcctcatcgaggacaactgcgacgccgtcggc
tccacctacaagggtcgtccgaccggctcgttcggggacgtggccacggtcagtttctac
ccggcccatcaccttgccatgggcgagggcggatgtgtgctgacggacaatctggtgctg
gcccgcatcgtggagtcgctccgcgactgggggcgcgactgctggtgcgagccgggcgag
gacaaccgctgcttcaagcgcttcgactaccagctcggtgacctgccgcacggctacgac
cacaagtacgtcttctcccacgtcggctacaacctgaaggccaccgatctgcaggccgcg
ctcgggctgagccaactgggcaagctgccggcgttcggggcggcccggcgggccaactgg
cgacgccttcgcgaggggctcgacacggtgcccggtctgatcctgcccgaggcgaccgaa
tccagtgacccgagctggttcggcttctgcctcacggtgcggcaggacgcgaactacacc
cgcaaggaactggtggccttcctggaggcgcgcaagatcggcacccgtcggttcttcgcc
ggcaacctcacccggcaccccgcctacatcgacgtgccgcggcgtatccacggctcgctg
gacaacagcgacctgatcgccgagcacaccttctgggtcggcgtcttcccgggtctcacc
gccgaaatgatcgactacatcgtggattccgtccgggagttcgccctcaagaactcctga
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